SustainPineDB

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Assembly info
Unigenes
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SSRs
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene56567

Length: 295 nt

Origin of reads: Biogeco_1

UniGene Fasta

>sp_v1.1_unigene56567
TGGCAGAAGGAAAATATGGACCTGTCTATAGGGCTGTTTTGACAGGTGGTCTCCACGTTGCTGTTAAGGTCCTGGTTCATGAAAAAACTCTCAATGACCAGGAGGCAGCAGCAGAGCTTGAATTTTTGGGTAAGATAAAGCACCCTAATCTGGTTCCTCTAGTTGGTTATTGTTTAGCAGGTGATCAGAGAATAGCAATTTATGATTTTATGGAGAATGGCACTCTTCATCATTGGCTTCATGATCTTCCGCTGGGTACAGAAGCCACAGAGGATTGGAGTGCAGATACATGGGA

Ace file of the UniGene sp_v1.1_unigene56567

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Y7_RICCO	-	-	1.0e-39	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	43%
Blast2go	protein	-	-	1.84555e-39	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	kinase activity	GO:0016301	Molecular Function	1.84555e-39	79%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	1.84555e-39	79%
Blast2go	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	1.84555e-39	79%
Blast2go	Protein kinase-like domain	IPR011009	-	1.84555e-39	79%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PRI9

Fln msg: Distance to subject end: 291 aas, your sequence is shorter than subject: 97 - 656

Fln protein: AEGKYGPVYRAVLTGGLHVAVKVLVHEKTLNDQEAAAELEFLGKIKHPNLVPLVGYCLAGDQRIAIYDFMENGTLHHWLHDLPLGTEATEDWSADTW

Protein Length: 98

Fln nts: TGGCAGAAGGAAAATATGGACCTGTCTATAGGGCTGTTTTGACAGGTGGTCTCCACGTTGCTGTTAAGGTCCTGGTTCATGAAAAAACTCTCAATGACCAGGAGGCAGCAGCAGAGCTTGAATTTTTGGGTAAGATAAAGCACCCTAATCTGGTTCCTCTAGTTGGTTATTGTTTAGCAGGTGATCAGAGAATAGCAATTTATGATTTTATGGAGAATGGCACTCTTCATCATTGGCTTCATGATCTTCCGCTGGGTACAGAAGCCACAGAGGATTGGAGTGCAGATACATGGGA

Fln Alignment:

sp_v1.1_unigene56567___EGKYGPVYRAVLTGGLHVAVKVLVHEKTLNDQEAAAELEFLGKIKHPNLVPLVGYCLAGDQRIAIYDFMENGTLHHWLH
C0PRI9_______________QGGFGYVYKGILPGSKTIAVKQLKVGGSQGEREFQAEVEIISRVHHRHLVSLVGYCIAGSQRLLVYEFVPNDTLEHHLH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain