SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene56536

Length: 273 nt

UniGene Fasta

>sp_v1.1_unigene56536
ATGGGGATTGCTAATACAGCTTTCAAAAGTACAGACTGGTTTTCGTAGCTAACAATCAGTGTTTCCCATGGAGGGTCCTTCACAGCTGAGATTTATGTTTGTTGTTTTCGCTATTCCCTTCTTCATTGTTCTTCAACAATGGGAATCTGCTAGTTGCGCTCATGCTGGAAGTAGTTTTGTGCAGAGAAGAGGCACTAACTTTGTTGTCAACGGAAGCCATCTGTATGTAAATGGGTTTAATTCATATTGGATGATGTTTGTAGCAACAAACCG

Ace file of the UniGene sp_v1.1_unigene56536

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Endo-beta-mannanase n=1 Tax=Vaccinium corymbosum RepID=C7A7Y0_VACCO	-	-	4.0e-06	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	64%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A9Z9

Fln msg: Distance to subject end: 358 aas, your sequence is shorter than subject: 68 - 429

Fln protein: MEGPSQLRFMFVVFAIPFFIVLQQWESASCAHAGSSFVQRRGTNFVVNGSHLYVNGFNSYWMMFVATN

Protein Length: 69

Fln nts: ATGGGGATTGCTAATACAGCTTTCAAAAGTACAGACTGGTTTTCGTAGCTAACAATCAGTGTTTCCC_-_ATGGAGGGTCCTTCACAGCTGAGATTTATGTTTGTTGTTTTCGCTATTCCCTTCTTCATTGTTCTTCAACAATGGGAATCTGCTAGTTGCGCTCATGCTGGAAGTAGTTTTGTGCAGAGAAGAGGCACTAACTTTGTTGTCAACGGAAGCCATCTGTATGTAAATGGGTTTAATTCATATTGGATGATGTTTGTAGCAACAAACCG

Fln Alignment:

sp_v1.1_unigene56536___SFVQRRGTNFVVNGSHLYVNGFNSYWMM
D5A9Z9_______________SFVERNGSHFVVDDKELYVNGWNSYWLM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain