SustainPineDB

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Assembly info
Unigenes
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene56396

Length: 246 nt

UniGene Fasta

>sp_v1.1_unigene56396
GACGCCGCTCTGCATCGGCTCGAGAAGTCCTCTAATGACAAATAATATTATCAATACCTGCCTCCTCCACGCATATTCCAACCGGGCGGAGACAAGGCTTCAGGTGGAGGAATTTGAGCTGGCGCTGGAGGATTCCGACAAGGCCCTTCTGGTCGATTCCAGCAATCTCAAAGCGCTCTCCAGGAAAGGGCGCTCTCTGATTGGTCTCAGGCAGTATGCAGCGGGATACAAATGCTTGGTGAAAGT

Ace file of the UniGene sp_v1.1_unigene56396

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	43%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Tetratricopeptide-like helical	IPR011990	-	0.0	-
Blast2go	Tetratricopeptide repeat-containing domain	IPR013026	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D8QTB3

Fln msg: Distance to subject end: 25 aas, your sequence is shorter than subject: 81 - 432

Fln protein: TPLCIGSRSPLMTNNIINTCLLHAYSNRAETRLQVEEFELALEDSDKALLVDSSNLKALSRKGRSLIGLRQYAAGYKCLVK

Protein Length: 82

Fln nts: GACGCCGCTCTGCATCGGCTCGAGAAGTCCTCTAATGACAAATAATATTATCAATACCTGCCTCCTCCACGCATATTCCAACCGGGCGGAGACAAGGCTTCAGGTGGAGGAATTTGAGCTGGCGCTGGAGGATTCCGACAAGGCCCTTCTGGTCGATTCCAGCAATCTCAAAGCGCTCTCCAGGAAAGGGCGCTCTCTGATTGGTCTCAGGCAGTATGCAGCGGGATACAAATGCTTGGTGAAAGT

Fln Alignment:

sp_v1.1_unigene56396___CIGSRSPLMTNNI----INTCLLHAYSNRAETRLQVEEFELALEDSDKALLVDSSNLKALSRKGRSLIGLRQY
D8QTB3_______________CINGCLDMLTSNTRVATVLEVLLLALSNRAEVYLRVAEFGKAVADADAALVIDVEHVKSLYRKGRGLMGLGEY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain