SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene56246

Length: 369 nt

UniGene Fasta

>sp_v1.1_unigene56246
CGTCGTGTCTTTGGCGTGGTCGTTTAAAACTTTTGGCAGGACTCGTCTCGATATTTTGGCAGGACTCGTAGGTAGAATTAGGAGTAAAAACTATGAGCCAGTTGTGGAGTATGTCTGCAGGTTTGGTTAATCAAGCAGCGGATTCGATTCCATTGCAACAATATATTGCAATTGGGAGTCTGGAGGACTTCTATGTGCGCGGAAAAATGGTGCCCAGTTTGTTGGAGGAAAAGAGGACAGTGAGGAACCCTAAGCCGGTTGCAGGACTCTGCTCGAGATGTGGGAGAGGGGTATATGTTGTGGAAGTGAAAAGCCAGCGCAGGCTTTGCTGCATAACAGTCCATTCTCGCACCTGGCGTGCCATCATGT

Ace file of the UniGene sp_v1.1_unigene56246

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	50%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: tr_plants

Fln subject: B3H6H2

Fln msg: STOP codon was not found. Distance to subject end: 12 aas,

Fln protein: MSQLWSMSAGLVNQAADSIPLQQYIAIGSLEDFYVRGKMVPSLLEEKRTVRNPKPVAGLCSRCGRGVYVVEVKSQRRLCCITVHSRTWRAIM

Protein Length: 93

Fln nts: CGTCGTGTCTTTGGCGTGGTCGTTTAAAACTTTTGGCAGGACTCGTCTCGATATTTTGGCAGGACTCGTAGGTAGAATTAGGAGTAAAAACT_-_ATGAGCCAGTTGTGGAGTATGTCTGCAGGTTTGGTTAATCAAGCAGCGGATTCGATTCCATTGCAACAATATATTGCAATTGGGAGTCTGGAGGACTTCTATGTGCGCGGAAAAATGGTGCCCAGTTTGTTGGAGGAAAAGAGGACAGTGAGGAACCCTAAGCCGGTTGCAGGACTCTGCTCGAGATGTGGGAGAGGGGTATATGTTGTGGAAGTGAAAAGCCAGCGCAGGCTTTGCTGCATAACAGTCCATTCTCGCACCTGGCGTGCCATCATGT

Fln Alignment:

sp_v1.1_unigene56246___LLEEKRTVRNPKPVAGLCSRCGRGVYVVEVKSQRRLCCITVHSRTWRAIM
B3H6H2_______________LVDQKRKVKGSKPAAGTCSRCGRGARVADMKTSTRFCLIPIYCRSWRAIV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain