SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene55801

Length: 420 nt

UniGene Fasta

>sp_v1.1_unigene55801
GATCAGAGGCTCTCAAGTTTTCTAACCCAGACATGCCGCTCTATGCCCATCTGTCCAGCGTGGATTCTACTGGTTCATCCATGAAGGTAACATGGATCAGCGGGAGCAATACTACACAATTTGTGCAATACGGTGCTGGAAAATCGGCCATGTCCACTGTGACAACGTTCACTCGAGCTGATATGTGCAGTCATGATCTGCTTCCAAGCCCAGCAATGGATTTTGGCTGGCACGATCCAGGGTATATTCATACAGCCTTAATGACGGGGCTGCTGCCTTCTCAGAAATATAGTTACAGATATGGAAGTGACAATGTGGGTTGGAGTTCTGTTGCGAGCTTCTCCACCCCTCCTGCATCAGGCGCCAGCGAGGTTCGATTTCTTGCATTCGGCGACATGGGAAAGGCTCCCCGCGATTCAT

Ace file of the UniGene sp_v1.1_unigene55801

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Nucleotide pyrophosphatase/phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9RGF7_RICCO	-	-	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	60%
Blast2go	diphosphonucleotide phosphatase 1	-	-	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Purple acid phosphatase-like, N-terminal	IPR008963	-	0.0	75%
Blast2go	Purple acid phosphatase, N-terminal	IPR015914	-	0.0	75%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQ97

Fln msg: Distance to subject end: 299 aas, your sequence is shorter than subject: 139 - 641

Fln protein: SEALKFSNPDMPLYAHLSSVDSTGSSMKVTWISGSNTTQFVQYGAGKSAMSTVTTFTRADMCSHDLLPSPAMDFGWHDPGYIHTALMTGLLPSQKYSYRYGSDNVGWSSVASFSTPPASGASEVRFLAFGDMGKAPRDS

Protein Length: 140

Fln nts: GATCAGAGGCTCTCAAGTTTTCTAACCCAGACATGCCGCTCTATGCCCATCTGTCCAGCGTGGATTCTACTGGTTCATCCATGAAGGTAACATGGATCAGCGGGAGCAATACTACACAATTTGTGCAATACGGTGCTGGAAAATCGGCCATGTCCACTGTGACAACGTTCACTCGAGCTGATATGTGCAGTCATGATCTGCTTCCAAGCCCAGCAATGGATTTTGGCTGGCACGATCCAGGGTATATTCATACAGCCTTAATGACGGGGCTGCTGCCTTCTCAGAAATATAGTTACAGATATGGAAGTGACAATGTGGGTTGGAGTTCTGTTGCGAGCTTCTCCACCCCTCCTGCATCAGGCGCCAGCGAGGTTCGATTTCTTGCATTCGGCGACATGGGAAAGGCTCCCCGCGATTCAT

Fln Alignment:

sp_v1.1_unigene55801___SEALKFSNPDMPLYAHLSSVDSTGSSMKVTWISGSNTTQFVQYGAGKSAMSTVTTFTRADMCSHDLLPSPAMDFGWHDPGYIHTALMTGLLPSQKYSYRYGSDNVGWSSVASFSTPPASGASEVRFLAFGDMGKAPRD
B8LQ97_______________SELLKFANPRAPLYGHLSSMDSSSTVMRLTWISGDGKPQYVHYGDGKLALSTVATFTPNDLC--DSFVSPAVDFGWHNPGFIHTALLDGLLPSKSYLYKYGSDEVGWSTTTIFSTPPAVGSNQLTFVTYGDMGKAERD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain