SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene55742

Length: 216 nt

UniGene Fasta

>sp_v1.1_unigene55742
AGAAAGAAGATCATGTGCTGGTGGTCTTGGCGAAGGTTCCCCAAAGAGTGAGAGGTCAGCGGATATGTTTTGTGATGACATATTTGGAGAATCACCTGCTAGAATTCGCAAACCGGGTAGAGGTGATGGGTTGCCGGTTGATACAAGTGGTCTTCATGACAACTGGGATGATGCAGAAGGATACTATGGTTACCGCATTGGTGAAGTTCTTGATGG

Ace file of the UniGene sp_v1.1_unigene55742

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	prp4, putative (EC:2.7.12.1); K08827 serine/threonine-protein kinase PRP4 [EC:2.7.11.1]	-	-	5.0e-24	69%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	77%
Blast2go	protein kinase family protein	-	-	1.75332e-26	77%

Source	ECs	Term	Type	e value	Identity
AutoFact	Non-specific serine/threonine protein kinase.	EC:2.7.11.1	-	5.0e-24	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	cytoplasm	GO:0005737	Cellular Component	1.75332e-26	77%
Blast2go	nucleus	GO:0005634	Cellular Component	1.75332e-26	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6HFP0

Fln msg: Distance to subject end: 320 aas, your sequence is shorter than subject: 71 - 1090

Fln protein: ERRSCAGGLGEGSPKSERSADMFCDDIFGESPARIRKPGRGDGLPVDTSGLHDNWDDAEGYYGYRIGEVLD

Protein Length: 72

Fln nts: AGAAAGAAGATCATGTGCTGGTGGTCTTGGCGAAGGTTCCCCAAAGAGTGAGAGGTCAGCGGATATGTTTTGTGATGACATATTTGGAGAATCACCTGCTAGAATTCGCAAACCGGGTAGAGGTGATGGGTTGCCGGTTGATACAAGTGGTCTTCATGACAACTGGGATGATGCAGAAGGATACTATGGTTACCGCATTGGTGAAGTTCTTGATGG

Fln Alignment:

sp_v1.1_unigene55742___ERRSCAGGLGEGSPKSERSADMFCDDIFGESPARIRKPGRGDGLPVDTSGLHDNWDDAEGYYGYRIGEVLD
F6HFP0_______________ERTSGAGGLGEGTPKSERPDDMFCDDIFGESPAGVRKSGRGDGLLIERSGLHDNWDDAEGYYSHRFGEILD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain