SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene55718

Length: 433 nt

UniGene Fasta

>sp_v1.1_unigene55718
CTGACTGGATCATGCACGAATACAGGCTTGAGACGAACGAGAACGCTCCTCCTCAGGAAGAAGGATGGGTGGTTTGCCGTGCCTTCAAGAAACGATCAACTGCCCAGAAGAAAGCAAATGATAGGGACTTCTCTGCAACTTCAGCTTGCTATGAAGCTGATCAGAATAGTTCATTACCTGAATTAGATTCTCTGGATATCAAACTTCCTCATCAACTAGATCACCACCAGTTTGGATACCAATTGCAGCAATTCTCAAGCTGCAAACAGGAGATGGAGCCACTCGACTACCAACTCGAGCACAACCCATTTCTGCAACTTCCTCAACTGGAGAGCCCAAAACTTCCTTGCAATGCTAACTCCTCCTCCAGTTCTGCTGGGAATAGGCGCGAATACTCTATGACAAGTTTACTGGAATCTGCAAACATGGAGAT

Ace file of the UniGene sp_v1.1_unigene55718

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NAC domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T2V2_RICCO	-	-	2.0e-25	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	40%
Blast2go	nac domain ipr003441	-	-	2.31334e-26	62%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to chitin	GO:0010200	Biological Process	2.31334e-26	62%

Source	InterPros	Term	Type	e value	Identity
Blast2go	No apical meristem (NAM) protein	IPR003441	-	2.31334e-26	62%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLZ9

Fln msg: Distance to subject end: 119 aas, your sequence is shorter than subject: 143 - 392

Fln protein: DWIMHEYRLETNENAPPQEEGWVVCRAFKKRSTAQKKANDRDFSATSACYEADQNSSLPELDSLDIKLPHQLDHHQFGYQLQQFSSCKQEMEPLDYQLEHNPFLQLPQLESPKLPCNANSSSSSAGNRREYSMTSLLESANME

Protein Length: 144

Fln nts: CTGACTGGATCATGCACGAATACAGGCTTGAGACGAACGAGAACGCTCCTCCTCAGGAAGAAGGATGGGTGGTTTGCCGTGCCTTCAAGAAACGATCAACTGCCCAGAAGAAAGCAAATGATAGGGACTTCTCTGCAACTTCAGCTTGCTATGAAGCTGATCAGAATAGTTCATTACCTGAATTAGATTCTCTGGATATCAAACTTCCTCATCAACTAGATCACCACCAGTTTGGATACCAATTGCAGCAATTCTCAAGCTGCAAACAGGAGATGGAGCCACTCGACTACCAACTCGAGCACAACCCATTTCTGCAACTTCCTCAACTGGAGAGCCCAAAACTTCCTTGCAATGCTAACTCCTCCTCCAGTTCTGCTGGGAATAGGCGCGAATACTCTATGACAAGTTTACTGGAATCTGCAAACATGGAGAT

Fln Alignment:

sp_v1.1_unigene55718___DWIMHEYRLETNENAPP------QEEGWVVCRAFKKRSTAQKKANDRDFSATSACYEADQNSSLPELDSLDIKLPHQLDHHQFGYQLQQFSSCKQEMEPLDYQLEHNPFLQLPQLESPKLP
B8LLZ9_______________DWIMHEYRLDDAEYPQANTFNELQEDGWVVCRVFKKRNHHKSQES----AELSPKYGSKQFSNNKILSDSDCPSDNLTDPLHYTHQLNM---CKQELEMQQYAFPHDQFMQLPQLESPKIP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain