SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene55579

Length: 853 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene55579

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	lipase class 3 family protein	-	-	1.4013e-45	43%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	49%
Blast2go	lipase class 3 family protein	-	-	0.0	62%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9T490

Fln msg: Distance to subject end: 522 aas, your sequence is shorter than subject: 283 - 945

Fln protein: GIFQGAVFDEDTSGDNLPSDESESSKERPDASTSKLRGTSYEGSQLGSTSDKPLSQNNSLERGFKPAAHQGFLARAKRIPAVELYKLAS*RCLSLVLCGHSLGGAVAVLATLAILRAIPSASLAKGGDGIQVKCVTFSQPPVGNAALREYVHRRGWQQHFRTYCIPEDVVPRILSPAYFQHYVKQLAEGDSPSTAFNSSSAHAANRSNVEEPRLQKAMPNEGEQLVLGLGPVQNSFHRLSRLVPLLGVQKQFDWFRRRREDANASLKEDDSDLTLKETSSLQA

Protein Length: 284

Fln nts: ATGGGATATTCCAAGGAGCTGTCTTTGATGAAGACACCAGTGGAGATAATTTACCAAGTGATGAAAGTGAATCAAGTAAAGAAAGGCCAGACGCTAGTACTAGTAAGTTGAGAGGGACATCATATGAGGGCAGTCAGTTAGGATCAACTTCTGACAAACCCCTTTCACAAAATAACTCATTGGAACGTGGATTTAAACCTGCTGCACATCAGGGATTTCTTGCCCGTGCTAAGCGTATACCTGCAGTGGAGCTATATAAACTTGCGTCGTGACGTTGTCTGTCACTTGTACTTTGTGGGCATTCCCTGGGTGGTGCGGTTGCAGTGCTTGCAACACTTGCTATTTTGAGGGCCATTCCGTCAGCTTCATTAGCAAAAGGTGGGGATGGTATTCAGGTCAAGTGCGTTACATTTTCACAGCCTCCAGTTGGAAATGCTGCTTTGAGAGAATATGTTCATAGGCGTGGGTGGCAACAGCATTTTAGGACATACTGTATTCCAGAAGATGTAGTACCTCGAATTTTATCGCCAGCTTATTTTCAGCATTATGTTAAACAACTAGCAGAAGGTGATTCTCCAAGTACTGCCTTTAATTCCTCTTCAGCACATGCTGCTAATAGATCAAATGTGGAGGAACCAAGGTTGCAAAAGGCAATGCCAAATGAAGGTGAACAATTGGTACTGGGTCTAGGTCCTGTTCAAAACTCTTTTCATAGACTCTCTAGATTGGTGCCCCTCTTAGGTGTCCAGAAACAGTTTGATTGGTTCAGACGACGAAGGGAAGATGCAAATGCTTCTTTGAAAGAAGATGATTCTGATTTGACTTTAAAAGAAACATCATCGCTACAAGCTCT

Fln Alignment:

sp_v1.1_unigene55579___IFQGAVFDEDTSGDNLPSDESESSKERPDASTSKLRGTSYEGSQLGSTSDKPLSQNNSLERGFKPAAHQGFLARAKRIPAVELYKLAS*RCLSLVLCGHSXXXXXXXXXXXXXXXXXPSASLAKGGDGIQVKCVTFSQPPVGNAALREYVHRRGWQQHFRTYCIPEDVVPRILSPAYFQHYVKQLAEGDSPXXXXXXXXXXXXXXXXVEEPRLQKAMPNEGEQLVLGLGPVQNSFHRLSRLVPLLGVQKQFDWFRRRREDANASLKEDDSDLT
B9T490_______________ILQGAIFHEDGMEDAAQMEGIDSGQGESQKGNGEYQWTPLEA--------KP----KQLKDQSKPAAHRGFLARAKGIPALELYRLAQKKNRKLVLCGHSLGGAVAALATLAILRVIAASSTSKENEKIQVKCITFSQPPVGNAALRDYVHEKGWQHYFKSYCIPEDLVPRILSPAYFHHYNAQPLPMRS--EVETSGQSISKREKGMEKSSIQKPKENEGEQLVLGLGPVQTSFWRLSRLVPLEGFRRKINEYTRKQVDPVETSATNNSAVT

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
422	25			75	0.996481
423		66		33	0.997464
424		66	33		0.997453
425	66		33		0.997453

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain