SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene55355

Length: 248 nt

UniGene Fasta

>sp_v1.1_unigene55355
TGGAAGAAAATGACCAAAACTATTTTGAGAACAAGGTTTCTCAGAGGCTAGTGCAACTAGATGTTGTAATGGAGCAGCTATCTTATCAAGTAATGCAGCACCATGAAGAAATGGTGAATGGGATGCAGCTAGTAATGGAGCTTGAACATGACCTACAGGTAGCAAATGTTATCTGTAAGAATGGACGGAGGCACCTATCTTCATCAATGCATGAGGTTTCGCGAGATCTTGTCATAACTTCCAATGCA

Ace file of the UniGene sp_v1.1_unigene55355

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF2450 domain containing protein	-	-	3.0e-21	45%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	65%
Blast2go	protein	-	-	1.64846e-24	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Vacuolar protein sorting-associated protein 54	IPR019515	-	1.64846e-24	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D8RDB2

Fln msg: Distance to subject end: 843 aas, your sequence is shorter than subject: 82 - 1005

Fln protein: EENDQNYFENKVSQRLVQLDVVMEQLSYQVMQHHEEMVNGMQLVMELEHDLQVANVICKNGRRHLSSSMHEVSRDLVITSNA

Protein Length: 83

Fln nts: TGGAAGAAAATGACCAAAACTATTTTGAGAACAAGGTTTCTCAGAGGCTAGTGCAACTAGATGTTGTAATGGAGCAGCTATCTTATCAAGTAATGCAGCACCATGAAGAAATGGTGAATGGGATGCAGCTAGTAATGGAGCTTGAACATGACCTACAGGTAGCAAATGTTATCTGTAAGAATGGACGGAGGCACCTATCTTCATCAATGCATGAGGTTTCGCGAGATCTTGTCATAACTTCCAATGCA

Fln Alignment:

sp_v1.1_unigene55355___EENDQNYFENKVSQRLVQLDVVMEQLSYQVMQHHEEMVNGMQLVMELEHDLQVANVICKNGRRHLSSSMHEVSRDLVITSN
D8RDB2_______________EQPTQEFFENKVSQRMLQLDDITEKLSIQVMEHHEEMVKGMQMVTEVEKDLQVSKIICKNGRRRLSLAMHEVSQDLVVAGN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain