SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene54919

Length: 263 nt

UniGene Fasta

>sp_v1.1_unigene54919
GAATGTGCTTCATCTTCGCCATTGGGCTTCACAAAGAGGTCAAACACTTTCCAGAACAGTACGAGGCATGATGTATTATAGAAGGGCGCTAAAGCTTCAAGCTTTTCTTGATATGGCTACTGAAAATGAGATTTTAGAAGGTTACAAGGCAGTTGCCTTTCCAACTGAGGAGGATAAGAAGAGCCAGAGGTCATTATGGGCTCAGCTGGAGGCTGTAGCTGACATGAAGTTCACTTATATTGCTGCTTGCCAGGACTATGGTA

Ace file of the UniGene sp_v1.1_unigene54919

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative beta-1,3-glucan synthase n=1 Tax=Nicotiana alata RepID=Q93XQ3_NICAL	-	-	4.0e-36	85%
FL-Next	sp=Callose synthase 5; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	80%
Blast2go	glucan synthase like 3	-	-	7.27802e-36	88%

Source	GOs	Term	Type	e value	Identity
Blast2go	pollen wall assembly	GO:0010208	Biological Process	7.27802e-36	88%
Blast2go	(1->3)-beta-D-glucan biosynthetic process	GO:0006075	Biological Process	7.27802e-36	88%
Blast2go	microsporogenesis	GO:0009556	Biological Process	7.27802e-36	88%
Blast2go	regulation of pollen tube growth	GO:0080092	Biological Process	7.27802e-36	88%
Blast2go	pollen germination	GO:0009846	Biological Process	7.27802e-36	88%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Glycosyl transferase, family 48	IPR003440	-	7.27802e-36	88%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q3B724

Fln msg: Distance to subject end: 703 aas, your sequence is shorter than subject: 87 - 1923

Fln protein: NVLHLRHWASQRGQTLSRTVRGMMYYRRALKLQAFLDMATENEILEGYKAVAFPTEEDKKSQRSLWAQLEAVADMKFTYIAACQDYG

Protein Length: 88

Fln nts: GAATGTGCTTCATCTTCGCCATTGGGCTTCACAAAGAGGTCAAACACTTTCCAGAACAGTACGAGGCATGATGTATTATAGAAGGGCGCTAAAGCTTCAAGCTTTTCTTGATATGGCTACTGAAAATGAGATTTTAGAAGGTTACAAGGCAGTTGCCTTTCCAACTGAGGAGGATAAGAAGAGCCAGAGGTCATTATGGGCTCAGCTGGAGGCTGTAGCTGACATGAAGTTCACTTATATTGCTGCTTGCCAGGACTATGGTA

Fln Alignment:

sp_v1.1_unigene54919___NVLHLRHWASQRGQTLSRTVRGMMYYRRALKLQAFLDMATENEILEGYKAVAFPTEEDKKSQRSLWAQLEAVADMKFTYIAACQDYG
Q3B724_______________NILQLRHWVSLRGQTLFRTVRGMMYYRRALKLQAFLDMANETEILAGYKAISEPTEEDKKSQRSLYTQLEAVADLKFTYVATCQNYG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain