SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene54773

Length: 400 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene54773
CGCACTGGCTCCATTTGGCCCGTATTTGAACTTTTTGAAGATAAGACTGCTCCGCACGTAGAGATCATCAAGCAGTGGTTGGATCCATTAGTAAAACAGACTTTGGAGCACAAGACAGCTGCTGAGAAAACTGTACGATAGAAGAAAAGACTTTCTTGGAGCATCTAGCCGACAGTACCGAAGACGCTGGGATGATTCGAGATCAACTGCTCAATATTCTATTGGCCGCTAGGGACACCACAGCGTGCCTTTTGACCTATGTAACTTATTTTATGGCACTGTATCCGAATATCGCAACCAAGATGCGGCGGGAGATACTTAACGTTTGCGGCAACAATGTTCCTACTTACGAAGATATTCGAAAGCTTAAATATATGCGAGCTGTTATCGACGAAACCCT

Ace file of the UniGene sp_v1.1_unigene54773

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytochrome P450 monooxygenase CYP63 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DSH0_LACBS	-	-	8.0e-34	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	29%
Blast2go	cytochrome p450	-	-	1.56593e-33	72%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome P450	IPR001128	-	1.56593e-33	72%
Blast2go	Cytochrome P450, E-class, group I	IPR002401	-	1.56593e-33	72%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NQC0

Fln msg: Distance to subject end: 136 aas, W1: There is no M at the beginning, your sequence is shorter than subject: 91 - 227

Fln protein: ENCTIEEKTFLEHLADSTEDAGMIRDQLLNILLAARDTTACLLTYVTYFMALYPNIATKMRREILNVCGNNVPTYEDIRKLKYMRAVIDET

Protein Length: 92

Fln nts: CGCACTGGCTCCATTTGGCCCGTATTTGAACTTTTTGAAGATAAGACTGCTCCGCACGTAGAGATCATCAAGCAGTGGTTGGATCCATTAGTAAAACAGACTTTGGAGCACAAGACAGCTGCTGAGAAAACTGTACGATAGAAGAAAAGACTTTCTTGGAGCATCTAGCCGACAGTACCGAAGACGCTGGGATGATTCGAGATCAACTGCTCAATATTCTATTGGCCGCTAGGGACACCACAGCGTGCCTTTTGACCTATGTAACTTATTTTATGGCACTGTATCCGAATATCGCAACCAAGATGCGGCGGGAGATACTTAACGTTTGCGGCAACAATGTTCCTACTTACGAAGATATTCGAAAGCTTAAATATATGCGAGCTGTTATCGACGAAACCCT

Fln Alignment:

sp_v1.1_unigene54773___EHLADSTEDAGMIRDQLLN----ILLAARDTTACLLTYVTYFMALYPNIATKMRREILNVCGNNVPTYEDIRKLKYMRAVIDET
A9NQC0_______________KELGGSQRNLSMTIDEIMNECKTFFFAGHDTTSNLLTWAVFLLSINPEWQEILRKEVISVCGTDIPDADMLSKMKSMTMVLNET

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain