SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene54772

Length: 409 nt

UniGene Fasta

>sp_v1.1_unigene54772
ACGGTAAATGTGACGGGGAATCTTGACGCCACTCCAACCGTTTTCGACAATCAGTACTTCAAAGACATGGTGAAGGGCAGAGGGTTCCTGAATTCTGACGAGGTTCTCTTCTCCACGGGCGGAGAAACCAGAGAGCTGGTGGAGCTCTTGAGCTTGGCTGTGGCTGCGTTCTTTTCCAGCTTCGCCGATTCCATGATAAATCTCGGGAATCTCTTCGCTTCACACACCTCGCACTGCGGCGAGATTCGGAGGGACTGCCGAAAGGTGAATTCATGAACCGCTGCTATAGGCGGAAAAGTTCCCAGATGCAGCAACCGGGTGTTGCTGTCACATAGACGAGACGATACGATATCATATGGAATAAATCACTACTGCTTTTGCGATGGGTATGGATGACACTTTCAGTCCT

Ace file of the UniGene sp_v1.1_unigene54772

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	peroxidase 17 (PER17) (P17); K00430 peroxidase [EC:1.11.1.7]	-	-	1.0e-12	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	peroxidase 17	-	-	9.08694e-31	66%

Source	ECs	Term	Type	e value	Identity
AutoFact	Peroxidase.	EC:1.11.1.7	-	1.0e-12	48%

Source	KEGGs	Term	e value	Identity
AutoFact	Phenylalanine metabolism	00360	1.0e-12	48%
AutoFact	Methane metabolism	00680	1.0e-12	48%
AutoFact	Phenylpropanoid biosynthesis	00940	1.0e-12	48%
AutoFact	Biosynthesis of phenylpropanoids	01061	1.0e-12	48%
AutoFact	Metabolic pathways	01100	1.0e-12	48%
AutoFact	Biosynthesis of secondary metabolites	01110	1.0e-12	48%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Plant peroxidase	IPR000823	-	9.08694e-31	66%
Blast2go	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	9.08694e-31	66%
Blast2go	Haem peroxidase	IPR010255	-	9.08694e-31	66%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A9Z0

Fln msg: your sequence is shorter than subject: 92 - 264

Fln protein: TVNVTGNLDATPTVFDNQYFKDMVKGRGFLNSDEVLFSTGGETRELVELLSLAVAAFFSSFADSMINLGNLFASHTSHCGEIRRDCRKVNS*

Protein Length: 93

Fln nts: ACGGTAAATGTGACGGGGAATCTTGACGCCACTCCAACCGTTTTCGACAATCAGTACTTCAAAGACATGGTGAAGGGCAGAGGGTTCCTGAATTCTGACGAGGTTCTCTTCTCCACGGGCGGAGAAACCAGAGAGCTGGTGGAGCTCTTGAGCTTGGCTGTGGCTGCGTTCTTTTCCAGCTTCGCCGATTCCATGATAAATCTCGGGAATCTCTTCGCTTCACACACCTCGCACTGCGGCGAGATTCGGAGGGACTGCCGAAAGGTGAATTCATGA___ACCGCTGCTATAGGCGGAAAAGTTCCCAGATGCAGCAACCGGGTGTTGCTGTCACATAGACGAGACGATACGATATCATATGGAATAAATCACTACTGCTTTTGCGATGGGTATGGATGACACTTTCAGTCCT

Fln Alignment:

sp_v1.1_unigene54772___NVTGNLDATPTVFDNQYFKDMVKGRGFLNSDEVLFSTGGETRXXXXXXXXXXXXXXXXXXDSMINLGNLFASHTSHCGEIRRDCRKVNS*TAA
D5A9Z0_______________NVTGNLDATPTVFDNQYFKDLVKGRGFLNSDEVLFSTGGETRQLVELFSKNQTAFFSSFTTSMINLGNLFSSHSLHCGEIRRDCRRVNSRTAA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain