SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene54744

Length: 314 nt

UniGene Fasta

>sp_v1.1_unigene54744
GCCAATGGGAGATGAATGAAAAACATGGGCGTGGACGGAAATACTATGCAAATGGGGATTTCTATGAAGGATTCTGGTCCCATGGTGTTCAGGAAGGGGAGGGCCGGTATATTTGGGAAAATGGTAATGAATACGTGGGTGAATGGAAAGGGGGTCTTATGTGTGGGAAAGGCACCCTGACATGGGCTAATGGGAATAAGTACGAGGGACAGTGGCTAGATGGGTTTGAACATGGGGAAGGTATATATACATGGGCAGATGGTAGTTGTTATGTTGGAACCTGGAACAAGGATCGTAAGGATGGGAATGGTACA

Ace file of the UniGene sp_v1.1_unigene54744

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phosphatidylinositol phoshate kinase n=2 Tax=Physcomitrella patens RepID=B5TVL9_9BRYO	-	-	4.99983e-42	66%
FL-Next	sp=Phosphatidylinositol-4-phosphate 5-kinase 6; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	38%
Blast2go	phosphatidylinositol-4-phosphate 5-	-	-	8.65862e-42	74%

Source	InterPros	Term	Type	e value	Identity
Blast2go	MORN motif	IPR003409	-	8.65862e-42	74%
Blast2go	Phosphatidylinositol-4-phosphate 5-kinase	IPR023610	-	8.65862e-42	74%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9SFB8

Fln msg: Distance to subject end: 508 aas, your sequence is shorter than subject: 104 - 715

Fln protein: QWEMNEKHGRGRKYYANGDFYEGFWSHGVQEGEGRYIWENGNEYVGEWKGGLMCGKGTLTWANGNKYEGQWLDGFEHGEGIYTWADGSCYVGTWNKDRKDGNGT

Protein Length: 105

Fln nts: GCCAATGGGAGATGAATGAAAAACATGGGCGTGGACGGAAATACTATGCAAATGGGGATTTCTATGAAGGATTCTGGTCCCATGGTGTTCAGGAAGGGGAGGGCCGGTATATTTGGGAAAATGGTAATGAATACGTGGGTGAATGGAAAGGGGGTCTTATGTGTGGGAAAGGCACCCTGACATGGGCTAATGGGAATAAGTACGAGGGACAGTGGCTAGATGGGTTTGAACATGGGGAAGGTATATATACATGGGCAGATGGTAGTTGTTATGTTGGAACCTGGAACAAGGATCGTAAGGATGGGAATGGTACA

Fln Alignment:

sp_v1.1_unigene54744___QWEMNEKHGRGRKYYANGDFYEGFWSHGVQEGEGRYIWENGNEYVGEWKGGLMCGKGTLTWANGNKYEGQWLDGFEHGEGIYTWADGSCYVGTWNKDRKDGNG
Q9SFB8_______________QWRDNLPHGHGKYLWTDGCMYVGDWHRGKTMGKGRFSWPSGATYEGDFKNGYMDGKGTYIDSSGDLYRGSWVMNLRHGQGTKSYVNGDCYDGEWRRGLQDGHG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain