SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene54463

Length: 330 nt

UniGene Fasta

>sp_v1.1_unigene54463
ATATCGTGAGCACAAGGATCGGCTTGTGCGGAAGAGCATTACATCGCTGCTACCTCGAATTGCTTCACTTTTTACGTGATCGTTTTGTCACATCTTATCTTAAGATTATGCATGGAACATATTCTGTCAGTACTCCGCACTCCAGCTGAACGTTGCAAGTGGAATTTGTAAGCTCTTGGTGAAATGGCTGGAGCCCTAGATGGAGAGTTGATAAACTATTTGCCGACAATTACGTCACATATACGTGATGCTATCACTCCACGTAGGGGCAAACCTTCTATGGAGGCGCTAGCATGTGCAGGGAGTTTGCAAAAGCTATGGGTCCTGCTA

Ace file of the UniGene sp_v1.1_unigene54463

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	fkbp-rapamycin associated protein, putative	-	-	4.0e-28	68%
FL-Next	sp=Serine/threonine-protein kinase TOR; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	85%
Blast2go	fkbp-rapamycin associated	-	-	2.44348e-28	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	embryo development ending in seed dormancy	GO:0009793	Biological Process	2.44348e-28	79%
Blast2go	transferase activity, transferring phosphorus-containing groups	GO:0016772	Molecular Function	2.44348e-28	79%
Blast2go	protein binding	GO:0005515	Molecular Function	2.44348e-28	79%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9FR53

Fln msg: Overlapping hits, possible frame ERROR between 64 and 60, and overlapping frame ERROR between 107 and 100, Distance to subject end: 2070 aas, your sequence is shorter than subject: 111 - 2481

Fln protein: YREHKDRLVRKSITSLLPRxxxHFLRDRFVTSxxxxxCMEHILSVLRTPAERCKWNL*ALGEMAGALDGELINYLPTITSHIRDAITPRRGKPSMEALACAGSLQKLWVLL

Protein Length: 112

Fln nts: ATATCGTGAGCACAAGGATCGGCTTGTGCGGAAGAGCATTACATCGCTGCTACCTCGAxxxxxxxxxCACTTTTTACGTGATCGTTTTGTCACATCTTxxxxxxxxxxxxTATGCATGGAACATATTCTGTCAGTACTCCGCACTCCAGCTGAACGTTGCAAGTGGAATTTGTAAGCTCTTGGTGAAATGGCTGGAGCCCTAGATGGAGAGTTGATAAACTATTTGCCGACAATTACGTCACATATACGTGATGCTATCACTCCACGTAGGGGCAAACCTTCTATGGAGGCGCTAGCATGTGCAGGGAGTTTGCAAAAGCTATGGGTCCTGCTA

Fln Alignment:

sp_v1.1_unigene54463___YREHKDRLVRKSITSLLPRxxHFLRDRFVTSYxxxCMEHILSVLRTPAERCKWNL*ALGEMAGALDGELINYLPTITSHIRDAITPRRGKPSMEALACAGSLQK
Q9FR53_______________YLEHRDRLVRLSITSLLPRxxHFLRDRFVTNYxxxCMNHILTVLRIPAERASGFI-ALGEMAGALDGELIHYLPTIMSHLRDAIAPRKGRPLLEAVACVGNIAK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain