SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene54419

Length: 273 nt

UniGene Fasta

>sp_v1.1_unigene54419
TCACTGGGTGCTTTTCATGTGGGTGTTGTGAGAACATTGATAGAGAATAGGCTTTTGCCCCGCGTGGTGGCAGGGGCGAGTGTGGGATCGATAATCTGTTCTGTCATCGCTACAAGGACTTGGCCGGAGTTGCAGAGCTTTTTTGAAGATTCAGTGCCGGCTCTGCGGTTTTTTGATCAGCTGGGTGGGGTTTTTGCAATTGTGAGGAGGGTTTTGACTGTTGGGACTGTTCATGAGATCAGGCAGTTGCAGAGAATGCTGAGGAATCTAACT

Ace file of the UniGene sp_v1.1_unigene54419

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Triacylglycerol lipase SDP1 n=2 Tax=Arabidopsis RepID=SDP1_ARATH	-	-	5.0e-34	74%
FL-Next	sp=Triacylglycerol lipase SDP1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	74%
Blast2go	protein	-	-	8.77221e-34	91%

Source	ECs	Term	Type	e value	Identity
Blast2go	Triacylglycerol lipase.	EC:3.1.1.3	-	8.77221e-34	91%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Glycerolipid metabolism	00561		8.77221e-34	91%
Blast2go	Metabolic pathways	01100		8.77221e-34	91%

Source	GOs	Term	Type	e value	Identity
Blast2go	triglyceride catabolic process	GO:0019433	Biological Process	8.77221e-34	91%
Blast2go	triglyceride lipase activity	GO:0004806	Molecular Function	8.77221e-34	91%
Blast2go	monolayer-surrounded lipid storage body	GO:0012511	Cellular Component	8.77221e-34	91%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Patatin/Phospholipase A2-related	IPR002641	-	8.77221e-34	91%
Blast2go	Acyl transferase/acyl hydrolase/lysophospholipase	IPR016035	-	8.77221e-34	91%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9LZA6

Fln msg: Distance to subject end: 496 aas, your sequence is shorter than subject: 91 - 825

Fln protein: SLGAFHVGVVRTLIENRLLPRVVAGASVGSIICSVIATRTWPELQSFFEDSVPALRFFDQLGGVFAIVRRVLTVGTVHEIRQLQRMLRNLT

Protein Length: 92

Fln nts: TCACTGGGTGCTTTTCATGTGGGTGTTGTGAGAACATTGATAGAGAATAGGCTTTTGCCCCGCGTGGTGGCAGGGGCGAGTGTGGGATCGATAATCTGTTCTGTCATCGCTACAAGGACTTGGCCGGAGTTGCAGAGCTTTTTTGAAGATTCAGTGCCGGCTCTGCGGTTTTTTGATCAGCTGGGTGGGGTTTTTGCAATTGTGAGGAGGGTTTTGACTGTTGGGACTGTTCATGAGATCAGGCAGTTGCAGAGAATGCTGAGGAATCTAACT

Fln Alignment:

sp_v1.1_unigene54419___SLGAFHVGVVRTLIENRLLPRVVAGASVGSIICSVIATRTWPELQSFFEDSVPALRFFDQLGGVFAIVRRVLTVGTVHEIRQLQRMLRNLT
Q9LZA6_______________SLGAFHVGVVRTLVEHKLLPRIIAGSSVGSIICAVVASRSWPELQSFFENSLHSLQFFDQLGGVFSIVKRVMTQGALHDIRQLQCMLRNLT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain