SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene54348

Length: 260 nt

Origin of reads: Biogeco_1

UniGene Fasta

>sp_v1.1_unigene54348
ATGGGGCCCTGGCGAAACGCTACGCTACTTCCTGCAGGAGCTGGGTGCTGCACTTCAAGGCAGGGATATCATACACCTCAGGGCGCCTGCGGTCATGGAACGGCTCCAACTGCTGCTAGTGGCAAGGGATATCATGCAATAGACAAACAGGGCGTGTAATGGGGCTTCTGTTGCTGGGGTTGCTGTCTGGGAGTGACTTCATATTGCATACCCAAATGAAGGGCACGCTGTCGGAGTCCTTGGGAGTTATCTCCAGTTTC

Ace file of the UniGene sp_v1.1_unigene54348

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9S2F4_RICCO	-	-	3.0e-09	45%
FL-Next	tr=Serine-threonine protein kinase, plant-type, putative; Ricinus communis (Castor bean).	-	-	0.0	50%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9S2F4

Fln msg: Distance to subject end: 545 aas, your sequence is shorter than subject: 86 - 653

Fln protein: GALAKRYATSCRSWVLHFKAGISYTSGRLRSWNGSNCC*WQGISCNRQTGRVMGLLLLGLLSGSDFILHTQMKGTLSESLGVISSF

Protein Length: 87

Fln nts: ATGGGGCCCTGGCGAAACGCTACGCTACTTCCTGCAGGAGCTGGGTGCTGCACTTCAAGGCAGGGATATCATACACCTCAGGGCGCCTGCGGTCATGGAACGGCTCCAACTGCTGCTAGTGGCAAGGGATATCATGCAATAGACAAACAGGGCGTGTAATGGGGCTTCTGTTGCTGGGGTTGCTGTCTGGGAGTGACTTCATATTGCATACCCAAATGAAGGGCACGCTGTCGGAGTCCTTGGGAGTTATCTCCAGTTTC

Fln Alignment:

sp_v1.1_unigene54348___VLHFKAGISY-TSGRLRSWNGSNCC*WQGISCNRQTGRVMXXXXXXXXXXXDFILHTQMKGTLSESLGVIS
B9S2F4_______________LISFKAGIHVDTSGRLAKWVGRSCCNWVGVTCDNTTGRVTAILLAGFISTDDFILQSEMKGWLSPSITLLS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain