SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene54291

Length: 518 nt

UniGene Fasta

>sp_v1.1_unigene54291
TTGTGGCTCCGTGATTCTCCTAATTTGAAATGTTTGTCCACAAGTTCTTTTCAACTGCCAAATCGATCTGGTTCCTACCAATTGTTGAATCGGTTGACAGAGTTGACCATAATGGACTGTGGGATAATGTCCTTATTACAAGATCTGGAGAAGATGAACAATCTCAAAGTTTTAAGAGTATGCAATTGTCCGTTGGAGGAACTGTCATTCAGAGTGGCCGTCAATATGATATCACAAAGAAACGCTAGATATGGCGCGGCCAGTAGATCGGAGGCATCCTGTGGTCAACGCGTCTGTCCCAACCTTCAACATCTCTGGATCTACTCTTGTAGAGATTTGGTGAAGGTTGGATCAATGCCAAAAACTCTGAAAACGGTGGACTTGAGTTATTGCAATACATTGAGGGAAATAGAAGGGCTCCCCGATCTGGCCAGGCTTGAACAGCTGGACATAAGNGGGTGTGAAGAAGTAGAGGAGCTGCCAAGTCTGCAGGCGTTGAAATCTTTGAAGAGCTTGAA

Ace file of the UniGene sp_v1.1_unigene54291

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J6_PINTA	-	-	7.0e-19	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Blast2go	tir nbs lrr disease resistance protein	-	-	2.21817e-26	60%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A8Y9

Fln msg: Distance to subject end: 79 aas, your sequence is shorter than subject: 135 - 170

Fln protein: MDCGIMSLLQDLEKMNNLKVLRVCNCPLEELSFRVAVNMISQRNARYGAASRSEASCGQRVCPNLQHLWIYSCRDLVKVGSMPKTLKTVDLSYCNTLREIEGLPDLARLEQLDIRGCEEVEELPSLQALKSLKSL

Protein Length: 136

Fln nts: TTGTGGCTCCGTGATTCTCCTAATTTGAAATGTTTGTCCACAAGTTCTTTTCAACTGCCAAATCGATCTGGTTCCTACCAATTGTTGAATCGGTTGACAGAGTTGACCATA_-_ATGGACTGTGGGATAATGTCCTTATTACAAGATCTGGAGAAGATGAACAATCTCAAAGTTTTAAGAGTATGCAATTGTCCGTTGGAGGAACTGTCATTCAGAGTGGCCGTCAATATGATATCACAAAGAAACGCTAGATATGGCGCGGCCAGTAGATCGGAGGCATCCTGTGGTCAACGCGTCTGTCCCAACCTTCAACATCTCTGGATCTACTCTTGTAGAGATTTGGTGAAGGTTGGATCAATGCCAAAAACTCTGAAAACGGTGGACTTGAGTTATTGCAATACATTGAGGGAAATAGAAGGGCTCCCCGATCTGGCCAGGCTTGAACAGCTGGACATAAGaGGGTGTGAAGAAGTAGAGGAGCTGCCAAGTCTGCAGGCGTTGAAATCTTTGAAGAGCTTGAA

Fln Alignment:

sp_v1.1_unigene54291___IYSCRDLVKVGSMPKTLKTVDLSYCNTLREIEGLPDLARLEQLDIRGCEEVEELPSLQALKSLKSL
D5A8Y9_______________IYSCTDLVKVESMPKTLKTVDFSYCSALREIKGLPDLAGLEQLDISGCEEVEELPSLQTLKSLKSL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain