SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene54228

Length: 533 nt

UniGene Fasta

>sp_v1.1_unigene54228
CGTCGTGACCTTGGCTGTCACTCATTTTAGCGGTGGCCGGTGCAATGAAAATCTTCAAGTGGATATAAATGGCACAAGGTCCCCCTTGAATAGTATTTCTATTCGTTTAAGGACTCCAGAAGGTTCATTTAGAACCATAGGTTTGCAACATGGTGGGATGGACCTCAGCGAGGACAATTAATAGCGACCAACGACCTGTGCTAGATCAGGTTGCTGGAGCTCTCATTTCTGATCAGGAAAATAGAAAGGTTCCATTGGTCGCTATATTGCGAAAGCCAGTATTGCTAGTGGCCATCCCACATTTGTTCTGGTCAGAGAATCCACGGCTTCTAATCCTGAGAAAGCCCAGCTCCTCGAGTCCTTCAAGGCCTCAGGAATATCTCTAGTCCAGGGATCTCTGGACGATTACCCAAGCCTACTGAAGGCAATTAAGTTGGTGGATGTAGTGATCTCCACAGTAGGCGCAGCGCAGGTAGCAGATCAGTATAGTATTATCAATGTTATCAAAGAGGTTAGCACTATTAAGGCTCAGC

Ace file of the UniGene sp_v1.1_unigene54228

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Isoflavone reductase-like protein CJP-6 n=1 Tax=Cryptomeria japonica RepID=Q8RYC0_CRYJA	-	-	2.0e-27	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	phenylcoumaran benzylic ether reductase	-	-	1.3906e-33	83%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NLB0

Fln msg: Distance to subject end: 196 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 96 - 303

Fln protein: KGSIGRYIAKASIASGHPTFVLVRESTASNPEKAQLLESFKASGISLVQGSLDDYPSLLKAIKLVDVVISTVGAAQVADQYSIINVIKEVSTIKAQ

Protein Length: 97

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTTAGCGGTGGCCGGTGCAATGAAAATCTTCAAGTGGATATAAATGGCACAAGGTCCCCCTTGAATAGTATTTCTATTCGTTTAAGGACTCCAGAAGGTTCATTTAGAACCATAGGTTTGCAACATGGTGGGATGGACCTCAGCGAGGACAATTAATAGCGACCAACGACCTGTGCTAGATCAGGTTGCTGGAGCTCTCATTTCTGATCAGGAAAATAGAAAGGTTCCATTGGTCGCTATATTGCGAAAGCCAGTATTGCTAGTGGCCATCCCACATTTGTTCTGGTCAGAGAATCCACGGCTTCTAATCCTGAGAAAGCCCAGCTCCTCGAGTCCTTCAAGGCCTCAGGAATATCTCTAGTCCAGGGATCTCTGGACGATTACCCAAGCCTACTGAAGGCAATTAAGTTGGTGGATGTAGTGATCTCCACAGTAGGCGCAGCGCAGGTAGCAGATCAGTATAGTATTATCAATGTTATCAAAGAGGTTAGCACTATTAAGGCTCAGC

Fln Alignment:

sp_v1.1_unigene54228___IGRYIAKASIASGHPTFVLVRESTASNPEKAQLLESFKASGISLVQGSLDDYPSLLKAIKLVDVVISTVGAAQVADQYSIINVIKEVSTIK
A9NLB0_______________IGRYVAKASIANGHPTFVLVRDSTASNPEKAQLLESFKASGITLLHGSLDNYASLLEAIKLVDVVICTVGAAQIADQFNIISTIKEVGSIK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain