SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene53945

Length: 224 nt

UniGene Fasta

>sp_v1.1_unigene53945
AACGTGATGCTGACCGAGCATGGTATGACAGGGAAGAAGTGGGAACAATGCTAGAGGGTGACTCCTCGTCATTGTTTATTGGGGATGAAGCAACCTTCTGGGAAAGGGAGTCTGAAATGGGAAAGCGATTGATTCGGAAAGATGGGACAAAGATGAGTCTCGCACAGAGCAAGAAGATGTCGCAGATGAGTGCAGACAATGCAGAGTGGGAAGACCGCCAGCTA

Ace file of the UniGene sp_v1.1_unigene53945

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SMB4_RICCO	-	-	1.0e-22	63%
FL-Next	tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean).	-	-	0.0	63%
Blast2go	atp-dependent rna	-	-	4.17242e-23	85%

Source	GOs	Term	Type	e value	Identity
Blast2go	hydrolase activity	GO:0016787	Molecular Function	4.17242e-23	85%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9SMB4

Fln msg: Distance to subject end: 851 aas, your sequence is shorter than subject: 74 - 1269

Fln protein: RDADRAWYDREEVGTMLEGDSSSLFIGDEATFWERESEMGKRLIRKDGTKMSLAQSKKMSQMSADNAEWEDRQL

Protein Length: 75

Fln nts: AACGTGATGCTGACCGAGCATGGTATGACAGGGAAGAAGTGGGAACAATGCTAGAGGGTGACTCCTCGTCATTGTTTATTGGGGATGAAGCAACCTTCTGGGAAAGGGAGTCTGAAATGGGAAAGCGATTGATTCGGAAAGATGGGACAAAGATGAGTCTCGCACAGAGCAAGAAGATGTCGCAGATGAGTGCAGACAATGCAGAGTGGGAAGACCGCCAGCTA

Fln Alignment:

sp_v1.1_unigene53945___DADRAWYDREEVGTMLEGDSSSLFIGDEATFWERESEMGKRLIRKDGTKMSLAQSKKMSQMSADNAEWEDRQL
B9SMB4_______________NSDRAWYDREEGSTMFDADSSSFYLGDEASFQKKEAELAKRLVRRDGSRMTLAQSKRLSQLTADNAQWEDRQL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain