SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene53910

Length: 261 nt

UniGene Fasta

>sp_v1.1_unigene53910
AGCGCGCGAATTCCATTGAGGCAGAGCAGCGAGTGAAAATGGGAAGCACATAAAATTAAGAAAGGACGATCAAGAAGAAAGAACAATGGCTGCCCAGTGGGTACTCGTATTGCATTGCTGCTTAACAGCTTTAGTAATCGTTGCATTTCTTTGTGGACAATGGCCCATTTTTGAAGGAACCTTTGTGCAGAAGATCAACCATTTCATCACTGTTGGAGCCTACGATCTTCTTCTAAGAGCGGCCTTAGTTCTTTGTGGATC

Ace file of the UniGene sp_v1.1_unigene53910

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	zinc finger protein, putative (EC:1.3.1.74)	-	-	8.0e-13	53%
FL-Next	Isoform 2 of Probable S-acyltransferase At3g04970 OS=Arabidopsis thaliana GN=At3g04970	-	-	0.0	58%
Blast2go	zinc finger family expressed	-	-	2.43409e-15	76%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q3EBC2-2

Fln msg: Distance to subject end: 257 aas, your sequence is shorter than subject: 58 - 316

Fln protein: MAAQWVLVLHCCLTALVIVAFLCGQWPIFEGTFVQKINHFITVGAYDLLLRAALVLCG

Protein Length: 59

Fln nts: AGCGCGCGAATTCCATTGAGGCAGAGCAGCGAGTGAAAATGGGAAGCACATAAAATTAAGAAAGGACGATCAAGAAGAAAGAACA_-_ATGGCTGCCCAGTGGGTACTCGTATTGCATTGCTGCTTAACAGCTTTAGTAATCGTTGCATTTCTTTGTGGACAATGGCCCATTTTTGAAGGAACCTTTGTGCAGAAGATCAACCATTTCATCACTGTTGGAGCCTACGATCTTCTTCTAAGAGCGGCCTTAGTTCTTTGTGGATC

Fln Alignment:

sp_v1.1_unigene53910___MAAQWVLVLHCCLTALVIVAFLCGQWPIFEGTFVQKINHFITVGAYDLLLR
Q3EBC2-2_____________MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFLTFGAYDYFLR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain