SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene53761

Length: 446 nt

UniGene Fasta

>sp_v1.1_unigene53761
AGATGCTACAGTGTGCAAGAGGCGTTAAAATCATGGTGCATGGGGGTGTGATCTTGGCTGTCGCTCAAATTCAGGGGCAGCAGGCACAAGGTTTGATATAGTTCGTCAAAGCCTCTTCATTAGTAATGAAAACATGTCAACACAAACCGATACACTGTTGTTGGATTTTCCTACCCATCCTCTTTGGACAAATGTTTTTGTGGAAAGCCATGCAAAAGTAGTGGTACCATTACGCTGGAGCCGAGTGCAGGTTTGGGGACAAATAAGTTTGATGTATGGAGGAACTCTGAGCTTCGGGCTTGTAAACTATCCTTTCTCAGAATTTGAACTGATAGCAGAAGAGCTTCTGATGAGTGACTCCATGGTGAAGGTTTATGGGGCATTGAGATTGTCTGTGAAAGTGTTACTAATGTGGAACTCCAAGCTACAATTGATAGGGACAAGAT

Ace file of the UniGene sp_v1.1_unigene53761

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	glycine-rich protein	-	-	4.99983e-42	63%
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice).	-	-	0.0	66%
Blast2go	glycine-rich protein	-	-	0.0	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuole	GO:0005773	Cellular Component	0.0	78%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B8ADN7

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 980 aas, your sequence is shorter than subject: 148 - 1184

Fln protein: DATVCKRR*NHGAWGCDLGCRSNSGAAGTRFDIVRQSLFISNENMSTQTDTLLLDFPTHPLWTNVFVESHAKVVVPLRWSRVQVWGQISLMYGGTLSFGLVNYPFSEFELIAEELLMSDSMVKVYGALRLSVKVLLMWNSKLQLIGTR

Protein Length: 149

Fln nts: AGATGCTACAGTGTGCAAGAGGCGTTAAAATCATGGTGCATGGGGGTGTGATCTTGGCTGTCGCTCAAATTCAGGGGCAGCAGGCACAAGGTTTGATATAGTTCGTCAAAGCCTCTTCATTAGTAATGAAAACATGTCAACACAAACCGATACACTGTTGTTGGATTTTCCTACCCATCCTCTTTGGACAAATGTTTTTGTGGAAAGCCATGCAAAAGTAGTGGTACCATTACGCTGGAGCCGAGTGCAGGTTTGGGGACAAATAAGTTTGATGTATGGAGGAACTCTGAGCTTCGGGCTTGTAAACTATCCTTTCTCAGAATTTGAACTGATAGCAGAAGAGCTTCTGATGAGTGACTCCATGGTGAAGGTTTATGGGGCATTGAGATTGTCTGTGAAAGTGTTACTAATGTGGAACTCCAAGCTACAATTGATAGGGACAAGAT

Fln Alignment:

sp_v1.1_unigene53761___HGAWGCDLGCRSNSGAAGTRFDIVRQSLFISNENMSTQTDTLLLDFPTHPLWTNVFVESHAKVVVPLRWSRVQVWGQISLMYGGTLSFGLVNYPFSEFELIAEELLMSDSMVKVYGALRLSVKVLLMWNSKLQLIG
B8ADN7_______________HG--GKSSGCPDNAGAAGTLYEAVPKSLVVSNNNLSTQTDTLLLEFPNQPLWTNVFVKNHAKVAVPLLWSRVQVQGQLSLLSGAILTFGLTRYPYSEFELMAEELLMSDSTIKVFGALRMSVKMLLMWNSKMLIDG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain