SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene53727

Length: 451 nt

UniGene Fasta

>sp_v1.1_unigene53727
TTTCAATTCACCGGAGCATGTAATTTCATCTCATCGTCCGAAGCGTGCAAGGGAAGGCTTTCTGTGCCCGCATCTCGCCCATTTTCCCTCCACGCGGGAATTGTATTTTACCCTGTTTATTGGCTTATCCGCATATTGCATTTCCTGTAACCTTCGGATCCTATATTTCAAATGAAAAGAGCACTGCTACCAGCATCTAATTCTTCATCCAAGAGTGGAAGTGGAAATTTGAGTTATGGCAACCAAAAGGAATGGCTATCAAAGCTTTTGCAGAAACATTTTGGACATTCCAACTTTAGAGGACGACAACTTGAGGCCATTGAGACTGTTTTAGCAGGAAAGGATTGTTTTTGTCTTATGCCAACAGGAGGTGAAAGTCCTTGTGCTATCAAATTCCTGCACTTGCAAAGGCTGGAATCGTTCTTGTTGTGTCACCACTGATAGCATTGAT

Ace file of the UniGene sp_v1.1_unigene53727

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	similar to predicted protein; K10902 ATP-dependent DNA helicase Q5 [EC:3.6.1.-]	-	-	2.0e-19	76%
FL-Next	sp=ATP-dependent DNA helicase Q-like 3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	71%
Blast2go	atp-dependent dna helicase	-	-	4.13347e-19	86%

Source	ECs	Term	Type	e value	Identity
AutoFact	Hydrolases, Acting on acid anhydrides, In phosphorous-containing anhydrides.	EC:3.6.1.-	-	2.0e-19	76%

Source	KEGGs	Term	e value	Identity
AutoFact	Purine metabolism	00230	2.0e-19	76%
AutoFact	Lipopolysaccharide biosynthesis	00540	2.0e-19	76%
AutoFact	Folate biosynthesis	00790	2.0e-19	76%
AutoFact	Metabolic pathways	01100	2.0e-19	76%

Source	GOs	Term	Type	e value	Identity
Blast2go	binding	GO:0005488	Molecular Function	4.13347e-19	86%
Blast2go	ATP-dependent helicase activity	GO:0008026	Molecular Function	4.13347e-19	86%

Source	InterPros	Term	Type	e value	Identity
Blast2go	DNA helicase, ATP-dependent, RecQ type	IPR004589	-	4.13347e-19	86%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q9FT72

Fln msg: Separated hits, possible frame ERROR between 372 and 375, Distance to subject end: 624 aas, your sequence is shorter than subject: 93 - 713

Fln protein: MKRALLPASNSSSKSGSGNLSYGNQKEWLSKLLQKHFGHSNFRGRQLEAIETVLAGKDCFCLMPTGxxKSLCYQIPALAKAGIVLVVSPLIAL

Protein Length: 94

Fln nts: TTTCAATTCACCGGAGCATGTAATTTCATCTCATCGTCCGAAGCGTGCAAGGGAAGGCTTTCTGTGCCCGCATCTCGCCCATTTTCCCTCCACGCGGGAATTGTATTTTACCCTGTTTATTGGCTTATCCGCATATTGCATTTCCTGTAACCTTCGGATCCTATATTTCAA_-_ATGAAAAGAGCACTGCTACCAGCATCTAATTCTTCATCCAAGAGTGGAAGTGGAAATTTGAGTTATGGCAACCAAAAGGAATGGCTATCAAAGCTTTTGCAGAAACATTTTGGACATTCCAACTTTAGAGGACGACAACTTGAGGCCATTGAGACTGTTTTAGCAGGAAAGGATTGTTTTTGTCTTATGCCAACAGGAGGxxxAAAGTCCTTGTGCTATCAAATTCCTGCACTTGCAAAGGCTGGAATCGTTCTTGTTGTGTCACCACTGATAGCATTGAT

Fln Alignment:

sp_v1.1_unigene53727___KEWLSKLLQKHFGHSNFRGRQLEAIETVLAGKDCFCLMPTGGxKSLCYQIPALAKAGIVLVVSPLIAL
Q9FT72_______________KEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPTGGxKSICYQIPALAKPGIVLVVSPLIAL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain