SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene53056

Length: 274 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene53056
GTATAGTTTTGGAGTAGTTTTGTTAGAGATCATATGCGGGCGAGCACCCATAGATATAAAACTGGCTGAAGAAAAAGTAAACATTGTTCGATGGGTGACACCATATCTGGTAGAGATGGGTGAAAATGGTGAAGAAATAATAGAAATCATAGACAAGAGGTTGGGTGGAAGTTACGACATGAAATCCATGACTCGTGTTGCCAAAGTAGCCTTGAGATGTGTTCAAACTGTGCCGTCTCGTAGGCCGAGTGTGGTTGAGTATAGTGGCAGAGCT

Ace file of the UniGene sp_v1.1_unigene53056

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO	-	-	1.0e-10	39%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	39%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein kinase-like domain	IPR011009	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKY1

Fln msg: Distance to subject end: 67 aas, your sequence is shorter than subject: 91 - 431

Fln protein: YSFGVVLLEIICGRAPIDIKLAEEKVNIVRWVTPYLVEMGENGEEIIEIIDKRLGGSYDMKSMTRVAKVALRCVQTVPSRRPSVVEYSGRA

Protein Length: 92

Fln nts: GTATAGTTTTGGAGTAGTTTTGTTAGAGATCATATGCGGGCGAGCACCCATAGATATAAAACTGGCTGAAGAAAAAGTAAACATTGTTCGATGGGTGACACCATATCTGGTAGAGATGGGTGAAAATGGTGAAGAAATAATAGAAATCATAGACAAGAGGTTGGGTGGAAGTTACGACATGAAATCCATGACTCGTGTTGCCAAAGTAGCCTTGAGATGTGTTCAAACTGTGCCGTCTCGTAGGCCGAGTGTGGTTGAGTATAGTGGCAGAGCT

Fln Alignment:

sp_v1.1_unigene53056___YSFGVVLLEIICGRAPIDIKLAEEKVNIVRWVTPYLVEMXXXXXXXXXXXDKRLGGSYDMKSMTRVAKVALRCVQTVPSRRPSV
B8LKY1_______________YSFGVVLLEMLTGRRSIDKHRSNGEQNLVEWARPYLVD----KRKLYRLVDPRLSGHYSIKGAQKVAQLAHYCLSRDPKARPTM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain