SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene52544

Length: 290 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene52544
CGTCGTGACCTTGGCTGTCACTCAGTGAATCGTTGTTATAGTTATTCCATCATCGATGGGAACATGGGGATAGAAGGGTATGTGGCGAACTTCCAAGTATACAATATGACCAATGGAAACTGCGTTGTAGCTTGGTGTTTCCAGGCAGATCCTTCAAAATACTATGAAGAGCAGCAATTTATTGGTTTCGCAACTGGTCAGATAGAACAAATAATCCAAGGGCTTGACGAAAGCGCTGCAACAGAGGAGTCTGCATAGTTTGTTTGCCATTCATCCTGATGCACAGATGG

Ace file of the UniGene sp_v1.1_unigene52544

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	1.0e-06	27%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	27%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Polyketide cyclase/dehydrase	IPR019587	-	0.0	-
Blast2go	START-like domain	IPR023393	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: A5BHR2

Fln msg: your sequence is shorter than subject: 86 - 163

Fln protein: RRDLGCHSVNRCYSYSIIDGNMGIEGYVANFQVYNMTNGNCVVAWCFQADPSKYYEEQQFIGFATGQIEQIIQGLDESAATEESA*

Protein Length: 87

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTGAATCGTTGTTATAGTTATTCCATCATCGATGGGAACATGGGGATAGAAGGGTATGTGGCGAACTTCCAAGTATACAATATGACCAATGGAAACTGCGTTGTAGCTTGGTGTTTCCAGGCAGATCCTTCAAAATACTATGAAGAGCAGCAATTTATTGGTTTCGCAACTGGTCAGATAGAACAAATAATCCAAGGGCTTGACGAAAGCGCTGCAACAGAGGAGTCTGCATAG___TTTGTTTGCCATTCATCCTGATGCACAGATGG

Fln Alignment:

sp_v1.1_unigene52544___VNRCYSYSIIDGNMGIEGYVANFQVYNMTNGNCVVAWCFQADPSKYYEEQQFIGFATGQIEQIIQGLDES
A5BHR2_______________INHCFSYEVLDNNMGFNSYVTTFKVIPINGGGCLIQWSFVCDPVQGWRYEDLASYIDSSLQFMAKKMEET

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain