SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene52486

Length: 288 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene52486
CGTCGTGACCTTGGCTGTCACTCAAAATTATAACTACGATGCCAATATTTGGTGTGGAAGCCAGGGGATTATCAATGGCACGACTGTGGAGGCCAAAGCGTGCGCTGATCCGGCTTCGTATATCATTTGGGATGGAGTTCACTGGACGGAGCATGCCAACAGACTGCTTACCCAAGCGATTCTGGGAGGCAAATACTTGGAACCTGCATTCTCCATTTCCAGTCAATGCGATCTTCAACCATTTTGATGACCTTCGAATTGATTAGTTTTAATAATGGAAGCGCAAAG

Ace file of the UniGene sp_v1.1_unigene52486

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	62%
Blast2go	lanatoside 15 -o-acetylesterase	-	-	1.63608e-19	68%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LK87

Fln msg: your sequence is shorter than subject: 82 - 384

Fln protein: VVTLAVTQNYNYDANIWCGSQGIINGTTVEAKACADPASYIIWDGVHWTEHANRLLTQAILGGKYLEPAFSISSQCDLQPF*

Protein Length: 83

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAAATTATAACTACGATGCCAATATTTGGTGTGGAAGCCAGGGGATTATCAATGGCACGACTGTGGAGGCCAAAGCGTGCGCTGATCCGGCTTCGTATATCATTTGGGATGGAGTTCACTGGACGGAGCATGCCAACAGACTGCTTACCCAAGCGATTCTGGGAGGCAAATACTTGGAACCTGCATTCTCCATTTCCAGTCAATGCGATCTTCAACCATTTTGA___TGACCTTCGAATTGATTAGTTTTAATAATGGAAGCGCAAAG

Fln Alignment:

sp_v1.1_unigene52486___YNYDANIWCGSQGIINGTTVEAKACADPASYIIWDGVHWTEHANRLLTQAILGGKYLEPAFSISSQCDL
B8LK87_______________YNYDYAVQCGISGTIAGHPVKAVSCAYPETYVNWDGVHWTDRANRILTKQILGGKYFEPAFSIASQCDI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain