SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene51241

Length: 209 nt

UniGene Fasta

>sp_v1.1_unigene51241
TTCCTCAATGCCAAATTTAAGTCACGTTCTGTATCATCCAGCCAGATACTTTCTCCGGAAACAAAGGAGGCAGCAGAACAAATTGATGCCAGGTTGCAGTTAGGATCAAAATTTAGCAATGTCATTTCTAGCCAGGGAGAAGCAGATGCTCTTTATGATCTATACCAAACTGAACAGTATCTTTTGGACCGAAAAAGAGGGTAAATTTC

Ace file of the UniGene sp_v1.1_unigene51241

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RUS1; RUS1 (ROOT UVB SENSITIVE 1)	-	-	7.0e-07	46%
FL-Next	tr=OSJNBb0096E05.17 protein; Oryza sativa subsp. japonica (Rice).	-	-	0.0	52%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein of unknown function DUF647	IPR006968	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q7XRQ7

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 90 aas, your sequence is shorter than subject: 68 - 593

Fln protein: FLNAKFKSRSVSSSQILSPETKEAAEQIDARLQLGSKFSNVISSQGEADALYDLYQTEQYLLDRKRG*

Protein Length: 69

Fln nts: TTCCTCAATGCCAAATTTAAGTCACGTTCTGTATCATCCAGCCAGATACTTTCTCCGGAAACAAAGGAGGCAGCAGAACAAATTGATGCCAGGTTGCAGTTAGGATCAAAATTTAGCAATGTCATTTCTAGCCAGGGAGAAGCAGATGCTCTTTATGATCTATACCAAACTGAACAGTATCTTTTGGACCGAAAAAGAGGGTAAATTTC

Fln Alignment:

sp_v1.1_unigene51241___FLNAKFKSRSVSSSQILSPETKEAAEQIDARLQLGSKFSNVISSQGEADALYDLYQTEQYLLDRKRG
Q7XRQ7_______________FLNLSIGT-SRKESKILSPQAKDAAEIICRRLQLGSKLSEIIENKEDACALFDLYKNEQYLLTEYKG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain