SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene50173

Length: 263 nt

UniGene Fasta

>sp_v1.1_unigene50173
TGTATCGACCTTGGCTGTCACTCATTTTAAGGTGACTTTCAGCCTGGCAGCTAAAGCGTTTGCCACCTCCTTGTCTCTATGTCGAGAGACATTTTTCTCCCGCGATATGTCCGATCTTCAAGTTGAAAGGTATCAAGAATTATTGAGAAATAGCTCAAGTGTGCCACTATTGGACTTAAGGAAGCTTAATGCGTCTTTGCCAGTTCCTCTGCTCCCAGAGCATGCTCCACCTGTCCTTGTTATGGGTGCAAGTGATGATTTCA

Ace file of the UniGene sp_v1.1_unigene50173

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	67%
Blast2go	esterase-like protein	-	-	1.33253e-21	73%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: C6T888

Fln msg: Distance to subject end: 50 aas, your sequence is shorter than subject: 87 - 256

Fln protein: VSTLAVTHFKVTFSLAAKAFATSLSLCRETFFSRDMSDLQVERYQELLRNSSSVPLLDLRKLNASLPVPLLPEHAPPVLVMGASDDF

Protein Length: 88

Fln nts: TGTATCGACCTTGGCTGTCACTCATTTTAAGGTGACTTTCAGCCTGGCAGCTAAAGCGTTTGCCACCTCCTTGTCTCTATGTCGAGAGACATTTTTCTCCCGCGATATGTCCGATCTTCAAGTTGAAAGGTATCAAGAATTATTGAGAAATAGCTCAAGTGTGCCACTATTGGACTTAAGGAAGCTTAATGCGTCTTTGCCAGTTCCTCTGCTCCCAGAGCATGCTCCACCTGTCCTTGTTATGGGTGCAAGTGATGATTTCA

Fln Alignment:

sp_v1.1_unigene50173___VTHFKVTFSLAAKAFATSLSLCRETFFSRDMSDLQVERYQELLRNSSSVPLLDLRKLNASLPVPLLPEHAPPVLVMGASDDF
C6T888_______________IVAFKVTRSLAAKAFQTSLSLCRETFFSATMEDHVVRRYQELMKESSRMPLFDLRKLNASLPVPSVPNCPFEILVLGAKDDF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain