SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene49270

Length: 249 nt

Origin of reads: Biogeco_2

UniGene Fasta

>sp_v1.1_unigene49270
ACCCTTTCAAGTGTGAACACTCAGACAGCTGTGAAGCCTGGTTCATGGAGCTTGTGGTTGCTAATGGAGGTGTCTCTGCCATGCATATGACCACGACCTTCAAAAATCAGTGGTTATGTTTGATCGCACGGACTATGGTCCTTCGCAACTGCTCCTCCCAAATGGACGTTGCAGAAACGATCCAAACGATGAAGCGCTCAAGCACGACTGCTGGGCACACTCCATCGAATACAATATCGCCACGAACAA

Ace file of the UniGene sp_v1.1_unigene49270

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	glyoxal oxidase-related	-	-	2.0e-11	63%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	56%
Blast2go	glyoxal oxidase-related	-	-	9.30467e-14	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D8RR64

Fln msg: Overlapping hits, possible frame ERROR between 116 and 110, Distance to subject end: 438 aas, your sequence is shorter than subject: 82 - 537

Fln protein: PFKCEHSDSCEAWFMELVVANGGVSAMHMTTTFKNxxxxFDRTDYGPSQLLLPNGRCRNDPNDEALKHDCWAHSIEYNIATN

Protein Length: 83

Fln nts: ACCCTTTCAAGTGTGAACACTCAGACAGCTGTGAAGCCTGGTTCATGGAGCTTGTGGTTGCTAATGGAGGTGTCTCTGCCATGCATATGACCACGACCTTCAAAAATxxxxxxxxxxxxTTTGATCGCACGGACTATGGTCCTTCGCAACTGCTCCTCCCAAATGGACGTTGCAGAAACGATCCAAACGATGAAGCGCTCAAGCACGACTGCTGGGCACACTCCATCGAATACAATATCGCCACGAACAA

Fln Alignment:

sp_v1.1_unigene49270___ELVVANGGVSAMHMTTTFKNQxxMFDRTDYGPSQLLLPNGRCRNDPNDEALKHDCWAHSIEYNIAT
D8RR64_______________ELLVENSGVSAMHMLVSHTNKxxIFDRTDYGPSAIRLPHGRCRNDSSDLALKIDCWAHSVELQIPT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain