SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene48908

Length: 506 nt

UniGene Fasta

>sp_v1.1_unigene48908
ATCAGAGAAGCGCTGGCGAAGGTTTTGGTATTTTACTATCCTTTTGCCGGAAGATTGAGAGAAGCGCCCTTCGGCAAGCTCCTGGTGGACTGCACCAGCGAAGGCGTGCTGTTTGTGGAAGCTGATGTCGACGTTTCCATGGAGGAATTTGGAGACTTGCACCCACCCTTCCCCTGCTTGGATGATCTGCTGCATGATGTGCCGGGCTCGGAAACTATTACCAATTCTCCCCTCCTCCTCATTCAGGTAACGCGGTTGAGATGCCGAGGGTTCATTTTCGCCCTTCGTTTGAATCACACCATGAGCGACGGGCTTGGCCTCGTTCAATTCTTGACAGCTCTTGGTGAAATGGCGAGGGGGGCGCGAGGCCTTCCGTTCATCCAGTTTGGGAAAGAGAAATCCTCCGACCCCGGATAAATCCCACAGTTAAATTCCCCCACTACGAATATGATCAAATCGAAGACAAAGACGGGCAGATGGCGAACGTGAAGGAGATGACCCACAGT

Ace file of the UniGene sp_v1.1_unigene48908

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Benzoyl CoA benzoic acid benzoyltransferase n=1 Tax=Glandularia x hybrida RepID=Q2PF15_VERHY	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	81%
Blast2go	benzoyl coenzyme a: benzyl alcohol benzoyl transferase	-	-	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Transferase	IPR003480	-	0.0	84%
Blast2go	Chloramphenicol acetyltransferase-like domain	IPR023213	-	0.0	84%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LL77

Fln msg: Overlapping hits, possible frame ERROR between 363 and 354, Distance to subject end: 217 aas, your sequence is shorter than subject: 169 - 448

Fln protein: IREALAKVLVFYYPFAGRLREAPFGKLLVDCTSEGVLFVEADVDVSMEEFGDLHPPFPCLDDLLHDVPGSETITNSPLLLIQVTRLRCRGFIFALRLNHTMSDGLGLVQFLTALGEMxxxxxRPSVHPVWEREILRPRINPTVKFPHYEYDQIEDKDGQMANVKEMTHS

Protein Length: 170

Fln nts: ATCAGAGAAGCGCTGGCGAAGGTTTTGGTATTTTACTATCCTTTTGCCGGAAGATTGAGAGAAGCGCCCTTCGGCAAGCTCCTGGTGGACTGCACCAGCGAAGGCGTGCTGTTTGTGGAAGCTGATGTCGACGTTTCCATGGAGGAATTTGGAGACTTGCACCCACCCTTCCCCTGCTTGGATGATCTGCTGCATGATGTGCCGGGCTCGGAAACTATTACCAATTCTCCCCTCCTCCTCATTCAGGTAACGCGGTTGAGATGCCGAGGGTTCATTTTCGCCCTTCGTTTGAATCACACCATGAGCGACGGGCTTGGCCTCGTTCAATTCTTGACAGCTCTTGGTGAAATGxxxxxxxxxxxxxxxAGGCCTTCCGTTCATCCAGTTTGGGAAAGAGAAATCCTCCGACCCCGGATAAATCCCACAGTTAAATTCCCCCACTACGAATATGATCAAATCGAAGACAAAGACGGGCAGATGGCGAACGTGAAGGAGATGACCCACAGT

Fln Alignment:

sp_v1.1_unigene48908___IREALAKVLVFYYPFAGRLREAPFGKLLVDCTSEGVLFVEADVDVSMEEFGDLHPPFPCLDDLLHDVPGSETITNSPLLLIQVTRLRCRGFIFALRLNHTMSDGLGLVQFLTALGEMAxxxARPSVHPVWEREILRPRINPTVKFPHYEYDQIEDKDGQMANVKEMTHS
B8LL77_______________IREGLAKALVFYYPFAGRLRDAPAGKLVVDCTGEGVLFVEADADVALEEFGDLQPPFPCWEDLLHDVPASLTLTNSPLLLIQVTRLRCGGFIFALRLNHTMCDAFGLVQFMNALGEMAxxxSRPSVRPVWKREILRPRTNPAVKFPLYEYNQIEDKDGQMVPVNEMSHN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain