SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene48575

Length: 378 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene48575
CTGTCAGGCTATTGCAGTAAAATCGTGCTACGAGTTTGAAGGGAAGTTCATCGACTATTTCCAGCGGGTCACCGGGAAACCGGTCATTCCCGTAGGTACGCTTCTGCAATCAAATGCCGGGCCTCTGGACTCCGAGTGCTTGAAATGGCTTGGAAGGAAGGCCGCTTCTTCCGTTGTGTATGCTTCCTTTGGCACCGAATGTTTTCTTTCGAGTGAAGAGATCCGAGAGGTGGCTATGGGATTGGAAGCGAGTGGGCATCCATTTATTTTAGTATTGCATTTTGCCCGCGGCCATGCCGGCGGCTCGACTTCATTGCCCGAGGATTTTGGAGAACGGATTGGGGACAGAGGGTTGGTATTGACTGACTGGGCGCCACA

Ace file of the UniGene sp_v1.1_unigene48575

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucosyltransferase, putative (EC:2.4.1.115)	-	-	7.0e-20	41%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	protein	-	-	0.0	61%

Source	InterPros	Term	Type	e value	Identity
Blast2go	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	61%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LR43

Fln msg: Distance to subject end: 137 aas, your sequence is shorter than subject: 125 - 491

Fln protein: CQAIAVKSCYEFEGKFIDYFQRVTGKPVIPVGTLLQSNAGPLDSECLKWLGRKAASSVVYASFGTECFLSSEEIREVAMGLEASGHPFILVLHFARGHAGGSTSLPEDFGERIGDRGLVLTDWAP

Protein Length: 126

Fln nts: CTGTCAGGCTATTGCAGTAAAATCGTGCTACGAGTTTGAAGGGAAGTTCATCGACTATTTCCAGCGGGTCACCGGGAAACCGGTCATTCCCGTAGGTACGCTTCTGCAATCAAATGCCGGGCCTCTGGACTCCGAGTGCTTGAAATGGCTTGGAAGGAAGGCCGCTTCTTCCGTTGTGTATGCTTCCTTTGGCACCGAATGTTTTCTTTCGAGTGAAGAGATCCGAGAGGTGGCTATGGGATTGGAAGCGAGTGGGCATCCATTTATTTTAGTATTGCATTTTGCCCGCGGCCATGCCGGCGGCTCGACTTCATTGCCCGAGGATTTTGGAGAACGGATTGGGGACAGAGGGTTGGTATTGACTGACTGGGCGCCACA

Fln Alignment:

sp_v1.1_unigene48575___CQAIAVKSCYEFEGKFIDYFQRVTGKPVIPVGTLLQSNAGPLDSECLKWLGRKAASSVVYASFGTECFLSSEEIREVAMGLEASGHPFILVLHFARGHAGGSTSLPEDFGERIGDRGLVLTDWAP
B8LR43_______________CEAIAIKSCYEFEGKFIEYFQQVTGKPVIPVGPLLQSNAGPLDSECLKWLGRQAASSVVYACFGTECFLSNEEIREVALGLEASGHPFILVLRFA-GHRDSSTSLPEAFEGRIRDRGLVLTDWAP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain