SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene48503

Length: 271 nt

UniGene Fasta

>sp_v1.1_unigene48503
GGACTTTTCAAGAATGCCAACTTAATTCAATTTTTCTTGCTGATGACACAAAACATACTCCTTATGGAAAAGGAGTAGTGAAAGTTTCTCTCCCTGACATTGGATAAAAATTGATTTCAAATGTATGGTATGTACCTAGTTTCAAGAAAAATTTGCTCTCTTTAGTCACGATTCGACAAGCAGGACATCAGGTGATTATGGAAGATGGTTTAGTGAAGATTAATTCAGTGAAACAGAATTTGAAAACNGTTATGACAGGTTATGAAGATGG

Ace file of the UniGene sp_v1.1_unigene48503

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH	-	-	6.0e-05	33%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	34%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A5ALW9

Fln msg: Distance to subject end: 845 aas, your sequence is shorter than subject: 89 - 1246

Fln protein: TFQECQLNSIFLADDTKHTPYGKGVVKVSLPDIG*KLISNVWYVPSFKKNLLSLVTIRQAGHQVIMEDGLVKINSVKQNLKTVMTGYED

Protein Length: 90

Fln nts: GGACTTTTCAAGAATGCCAACTTAATTCAATTTTTCTTGCTGATGACACAAAACATACTCCTTATGGAAAAGGAGTAGTGAAAGTTTCTCTCCCTGACATTGGATAAAAATTGATTTCAAATGTATGGTATGTACCTAGTTTCAAGAAAAATTTGCTCTCTTTAGTCACGATTCGACAAGCAGGACATCAGGTGATTATGGAAGATGGTTTAGTGAAGATTAATTCAGTGAAACAGAATTTGAAAACaGTTATGACAGGTTATGAAGATGG

Fln Alignment:

sp_v1.1_unigene48503___NSIFLADDTKHTPYGKGVVKVSLPDIG*KLISNVWYVPSFKKNLLSLVTIRQAGHQVIMEDGLVKINSVKQNL
A5ALW9_______________NSVTFGDNSKVSVMGKGSVRIHSKEKSDKIISNVFFVPDLKTTLLSVGQLQEKGYEIFIKDGVCRIQDEKLGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain