SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene48291

Length: 716 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene48291

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Homeodomain-leucine zipper protein 57 n=1 Tax=Glycine max RepID=Q9SP47_SOYBN	-	-	1.0e-34	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Blast2go	protein	-	-	6.90299e-35	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to salt stress	GO:0009651	Biological Process	6.90299e-35	80%
Blast2go	leaf morphogenesis	GO:0009965	Biological Process	6.90299e-35	80%
Blast2go	response to blue light	GO:0009637	Biological Process	6.90299e-35	80%
Blast2go	positive regulation of cellular transcription, DNA-dependent	GO:0045941	Biological Process	6.90299e-35	80%
Blast2go	sequence-specific DNA binding	GO:0043565	Molecular Function	6.90299e-35	80%
Blast2go	transcription activator activity	GO:0016563	Molecular Function	6.90299e-35	80%
Blast2go	protein homodimerization activity	GO:0042803	Molecular Function	6.90299e-35	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Helix-turn-helix motif	IPR000047	-	6.90299e-35	80%
Blast2go	Homeodomain	IPR001356	-	6.90299e-35	80%
Blast2go	Leucine zipper, homeobox-associated	IPR003106	-	6.90299e-35	80%
Blast2go	Homeodomain-like	IPR009057	-	6.90299e-35	80%
Blast2go	Homeodomain-related	IPR012287	-	6.90299e-35	80%
Blast2go	Homeobox, conserved site	IPR017970	-	6.90299e-35	80%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	G %	T %	Probability
566	75		25	0.996473
567	25		75	0.996481
635	66	33		0.997453

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain