SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene47609

Length: 407 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene47609
TAAACTTATGAGTCTTGGTGGCGGAAAGTCACCCGCTCTTGACATGGCTGTTAACCGCGCGGTTGACGCTGGTCTCCACTTTGCCGTTGCGGCCGGTAACGATGACAAAGATGCCTGCAATTACTCTCCTGCAGCAGCTGAGAAGGCAGTGACTGTCGGTGCTTCCACGCTTGGTGATGAGCGTGCATACTTCTCCAACCACGGTAAATGTGTAGATGTTTTCGCTCCTGGTCTTAACATCTTGTCCACATACATTGGTAGCAAAGAGGCCATTGCTACTCTCTCTGGCACCTCAATGGCTTCACCCCACACCGCTGGCATGCTTGCATACCTCTTGTCGATATACCCTTCCACGACCTTCAACCCAACATTCGACTCTGAGTTCTTTGCCCCCGTGTTCCCTTATT

Ace file of the UniGene sp_v1.1_unigene47609

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	serine-type endopeptidase	-	-	81%
FL-Next	tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley).	-	-	73%
Blast2go	proteinase b	-	-	87%

Source	InterPros	Term	Type	Identity
Blast2go	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	87%
Blast2go	Peptidase S8, subtilisin-related	IPR015500	-	87%
Blast2go	Peptidase S8, subtilisin, Ser-active site	IPR023828	-	87%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F2E033

Fln msg: Distance to subject end: 112 aas, your sequence is shorter than subject: 135 - 520

Fln protein: KLMSLGGGKSPALDMAVNRAVDAGLHFAVAAGNDDKDACNYSPAAAEKAVTVGASTLGDERAYFSNHGKCVDVFAPGLNILSTYIGSKEAIATLSGTSMASPHTAGMLAYLLSIYPSTTFNPTFDSEFFAPVFPY

Protein Length: 136

Fln nts: TAAACTTATGAGTCTTGGTGGCGGAAAGTCACCCGCTCTTGACATGGCTGTTAACCGCGCGGTTGACGCTGGTCTCCACTTTGCCGTTGCGGCCGGTAACGATGACAAAGATGCCTGCAATTACTCTCCTGCAGCAGCTGAGAAGGCAGTGACTGTCGGTGCTTCCACGCTTGGTGATGAGCGTGCATACTTCTCCAACCACGGTAAATGTGTAGATGTTTTCGCTCCTGGTCTTAACATCTTGTCCACATACATTGGTAGCAAAGAGGCCATTGCTACTCTCTCTGGCACCTCAATGGCTTCACCCCACACCGCTGGCATGCTTGCATACCTCTTGTCGATATACCCTTCCACGACCTTCAACCCAACATTCGACTCTGAGTTCTTTGCCCCCGTGTTCCCTTATT

Fln Alignment:

sp_v1.1_unigene47609___MSLGGGKSPALDMAVNRAVDAGLHFAVAAGNDDKDACNYSPAAAEKAVTVGASTLGDERAYFSNHGKCVDVFAPGLNILSTYIGSKEAIATLSGTSMASPHTAGMLAYLLS
F2E033_______________MSLGGGASKTLDKVVNAAVDAGVHFAVAAGNDNRNACNYSPATAEKAVTVGASAIDDSMATFSNIGKCVDVFAPGKDILSTWIGSNVATNTISGTSMASPHVAGLLAYLAS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain