SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene47367

Length: 430 nt

UniGene Fasta

>sp_v1.1_unigene47367
GCAAATGAATAAGGAAACCCTACACGGACAGCTTGGGATGCGCATCTCTTCCTGTTCTCTTTCAATAGCAATTCTATGGGGTTGCAGAGATATACACAGGTGAAGGACATGGGTGCGGGTGACTTTAGATCTGTATTTTCCATCGCCGATCACAGGTCCCTTTACCAAGATCCGCACAGATTCAGCCCCAATCAATAACATCCGCAGAAGAAATGCGGCCGTCTGAATTGGTGCAGCAAACCGATCAAGCAGCAACAACCGCAAGAGGAGGAGATACTGCGTTTAGGAAGGGTGTGCGCTATGGAGAATGTCGAAAGAATCACGCTGCCAACATTGGGGGTTATGCTGTCGATGGTTGTGGAGAATTTATGGCCTGCGGAGAGGAAGGAACCGCTGCAGCCATGGAGTGTGCAGCTTGCAATTGTCACCG

Ace file of the UniGene sp_v1.1_unigene47367

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI	-	-	3.0e-18	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%
Blast2go	protein	-	-	1.69464e-39	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	IPR006456	-	1.69464e-39	75%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NYD8

Fln msg: Distance to subject end: 20 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 100 - 139

Fln protein: ICIFHRRSQVPLPRSAQIQPQSITSAEEMRPSELVQQTDQAATTARGGDTAFRKGVRYGECRKNHAANIGGYAVDGCGEFMACGEEGTAAAMECAACNCH

Protein Length: 101

Fln nts: GCAAATGAATAAGGAAACCCTACACGGACAGCTTGGGATGCGCATCTCTTCCTGTTCTCTTTCAATAGCAATTCTATGGGGTTGCAGAGATATACACAGGTGAAGGACATGGGTGCGGGTGACTTTAGATCTGTATTTTCCATCGCCGATCACAGGTCCCTTTACCAAGATCCGCACAGATTCAGCCCCAATCAATAACATCCGCAGAAGAAATGCGGCCGTCTGAATTGGTGCAGCAAACCGATCAAGCAGCAACAACCGCAAGAGGAGGAGATACTGCGTTTAGGAAGGGTGTGCGCTATGGAGAATGTCGAAAGAATCACGCTGCCAACATTGGGGGTTATGCTGTCGATGGTTGTGGAGAATTTATGGCCTGCGGAGAGGAAGGAACCGCTGCAGCCATGGAGTGTGCAGCTTGCAATTGTCACCG

Fln Alignment:

sp_v1.1_unigene47367___HRRSQVPLPRSAQIQPQSITSAEEMRPSELVQQTDQAATTARGGDTAFRKGVRYGECRKNHAANIGGYAVDGCGEFMACGEEGTAAAMECAACNCH
A9NYD8_______________HRRSEAPVTRSVQIQPQSITAEEEMRLSELGHQNEAAAAATARGVIASRKGVRYGECRKNHAASIGGYAVDGCGEFMASGEEGTAAAMKCAACNCH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain