SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene47333

Length: 223 nt

UniGene Fasta

>sp_v1.1_unigene47333
CTCGGGCATCCTCCTTTATGAAGATACTAGAGCTTATCTCGCTGACACTGTTTCCTCCAACTATGTTGTTTGTGGAGAATGTAGTTGGGTTTGAGTCTTCTATTACACACAAGCGGATGATGGAGTCTTGAAGAAAATTGGATTTATCACACAAGAATTCATCTTGAGTCCTCTTCAGTTCTGTGTACCTTATTCTCGTCCTCGTTATTCTGCCTTGATTCCC

Ace file of the UniGene sp_v1.1_unigene47333

If you push the Download ace button, you will download an ace file of this UniGene.

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Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNMT2; DNMT2 (DNA METHYLTRANSFERASE-2); DNA binding; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]	-	-	2.0e-16	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Blast2go	dna methyltransferase-2	-	-	6.73749e-24	77%

Source	ECs	Term	Type	e value	Identity
AutoFact	DNA (cytosine-5-)-methyltransferase.	EC:2.1.1.37	-	2.0e-16	63%

Source	KEGGs	Term	Type	e value	Identity
AutoFact	Cysteine and methionine metabolism	00270		2.0e-16	63%
AutoFact	Metabolic pathways	01100		2.0e-16	63%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ACF9

Fln msg: Overlapping hits, possible frame ERROR between 140 and 125, Distance to subject end: 205 aas, your sequence is shorter than subject: 74 - 380

Fln protein: RASSFMKILELISLTLFPPTMLFVENVVGFESSITHKRMMxxxxxxxFITQEFILSPLQFCVPYSRPRYSALIP

Protein Length: 75

Fln nts: CTCGGGCATCCTCCTTTATGAAGATACTAGAGCTTATCTCGCTGACACTGTTTCCTCCAACTATGTTGTTTGTGGAGAATGTAGTTGGGTTTGAGTCTTCTATTACACACAAGCGGATGATGxxxxxxxxxxxxxxxxxxxxxTTTATCACACAAGAATTCATCTTGAGTCCTCTTCAGTTCTGTGTACCTTATTCTCGTCCTCGTTATTCTGCCTTGATTCCC

Fln Alignment:

sp_v1.1_unigene47333___RASSFMKILELISLTLFPPTMLFVENVVGFESSITHKRMMExxxxxGFITQEFILSPLQFCVPYSRPRYSAL
D5ACF9_______________RAYSFMKILELIPLTLFPPTMLFVENVVGFESSITHKRMMExxxxxGFITQEFILSPLQFYVPYSRPRYFCL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain