SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene47267

Length: 362 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene47267
ACGGTTACAGTAAAATCAAATATCTCAACTCCAAATTCCAGTACAGATCACCAACCCCTGATTCGAATAATAGCATCGATCACTCCACCAATTCAAGCTCCATATTTATTAAGATGTGTCCCGGATCTCGTGACAGATGACAGTGGGGCCATGTTATCAGACTATATTGTTCGGATGAACAAGAACCGTCCTCAGGAAGGACGTTGGATTACCAGGACTGTATTCAACCATGCCTGGAAAGAATGTTTCGTCGTACGCATCAGAGTTGCCAGAGGTACATGGAAGAAGAGAAGAGGTGATGGACCAGTAGGAGTCGACTGGAATGAGAGAGTTATCCAAATTTGCGAGGGTTCTTGGAACTA

Ace file of the UniGene sp_v1.1_unigene47267

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	61%
Blast2go	protein	-	-	8.198e-32	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	8.198e-32	75%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RFE6

Fln msg: Distance to subject end: 243 aas, your sequence is shorter than subject: 120 - 439

Fln protein: TVTVKSNISTPNSSTDHQPLIRIIASITPPIQAPYLLRCVPDLVTDDSGAMLSDYIVRMNKNRPQEGRWITRTVFNHAWKECFVVRIRVARGTWKKRRGDGPVGVDWNERVIQICEGSWN

Protein Length: 121

Fln nts: ACGGTTACAGTAAAATCAAATATCTCAACTCCAAATTCCAGTACAGATCACCAACCCCTGATTCGAATAATAGCATCGATCACTCCACCAATTCAAGCTCCATATTTATTAAGATGTGTCCCGGATCTCGTGACAGATGACAGTGGGGCCATGTTATCAGACTATATTGTTCGGATGAACAAGAACCGTCCTCAGGAAGGACGTTGGATTACCAGGACTGTATTCAACCATGCCTGGAAAGAATGTTTCGTCGTACGCATCAGAGTTGCCAGAGGTACATGGAAGAAGAGAAGAGGTGATGGACCAGTAGGAGTCGACTGGAATGAGAGAGTTATCCAAATTTGCGAGGGTTCTTGGAACTA

Fln Alignment:

sp_v1.1_unigene47267___IRIIASITPPIQAPYLLRCVPDLVTDDSGAMLSDYIVRMNKNRPQEGRWITRTVFNHAWKECFVVRIRVARGTWKKRRGDGPVGVDWNERVIQICEGSW
B9RFE6_______________VRVVASITPPVQASYLLKCVPDRVTDDSGAMVSDVILRMNHYKPQEGRWLSRTVLDHAGRECFVIRMRVGGGIW-RRGGETPSAVRWEDRIIEVREGSW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain