SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene47194

Length: 288 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene47194
GAGAGCCATTCTGGAGCGTTCCCTTTGGTAGGAAAGACGGTCGCATCTCCCTAGCAAGGGAAACATATATCGTTCCGCAAGGCCATGAAAATTTGACTGCATTGATAGAATTGTTCCAGTCAAGGGGACTCACTATTCTTGATTTAGTTATTCTTTCAGGGTGCCCACACAATTGGGAGAAGCGTTTGCAGTGTGATACAGGACAGGCTTTACAACTTCAATGGCACCCGCAAGCCTGATCCAACCATGGATCCCACATATGTTACATACCTGAAAAAAAGTGCACTT

Ace file of the UniGene sp_v1.1_unigene47194

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cationic peroxidase, putative; K00430 peroxidase [EC:1.11.1.7]	-	-	2.0e-17	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	43%
Blast2go	peroxidase 39	-	-	4.1883e-27	75%

Source	ECs	Term	Type	e value	Identity
AutoFact	Peroxidase.	EC:1.11.1.7	-	2.0e-17	51%

Source	KEGGs	Term	e value	Identity
AutoFact	Phenylalanine metabolism	00360	2.0e-17	51%
AutoFact	Methane metabolism	00680	2.0e-17	51%
AutoFact	Phenylpropanoid biosynthesis	00940	2.0e-17	51%
AutoFact	Biosynthesis of phenylpropanoids	01061	2.0e-17	51%
AutoFact	Metabolic pathways	01100	2.0e-17	51%
AutoFact	Biosynthesis of secondary metabolites	01110	2.0e-17	51%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	4.1883e-27	75%
Blast2go	Haem peroxidase	IPR010255	-	4.1883e-27	75%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P1P4

Fln msg: Overlapping hits, possible frame ERROR between 161 and 160, Distance to subject end: 90 aas, your sequence is shorter than subject: 96 - 324

Fln protein: EPFWSVPFGRKDGRISLARETYIVPQGHENLTALIELFQSRGLTILDLVILSxxAHTIGRSVCSVIQDRLYNFNGTRKPDPTMDPTYVTYLKKSAL

Protein Length: 97

Fln nts: GAGAGCCATTCTGGAGCGTTCCCTTTGGTAGGAAAGACGGTCGCATCTCCCTAGCAAGGGAAACATATATCGTTCCGCAAGGCCATGAAAATTTGACTGCATTGATAGAATTGTTCCAGTCAAGGGGACTCACTATTCTTGATTTAGTTATTCTTTCAxxxxxxGCCCACACAATTGGGAGAAGCGTTTGCAGTGTGATACAGGACAGGCTTTACAACTTCAATGGCACCCGCAAGCCTGATCCAACCATGGATCCCACATATGTTACATACCTGAAAAAAAGTGCACTT

Fln Alignment:

sp_v1.1_unigene47194___PFWSVPFGRKDGRISLARETYI-VPQGHENLTALIELFQSRGLTILDLVILSxAHTIGRSVCSVIQDRLYNFNGTRKPDPTMDPTYVTYLK
A9P1P4_______________PFWNVPTGRRDGVVSIQNEAVAKLPPPNGTFSKLKSIFASNGLDVKDLVVLSxGHTIGMSHCNSFSSRLYNFTGKGDMDPSLDKSYAAHLK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain