SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene47080

Length: 296 nt

UniGene Fasta

>sp_v1.1_unigene47080
AAACTGGCCCTGTGATGGCTCTTCGTTTAACAGTATTTAAGGAAGGCAACACCAATGTGGTAAAAGTGGCTGACTGGATGCCAAGAAATGAAGATTTGGCAGTCATGCCTGTTGGGATTTTGGAATCCTCTCAATGCGAACATACGCTGTCAGCTGTTGGATCTGATATCAGTTTCATGTTATTGTTGAGCTTGCAGAATTTGGGCTGTCTGTGGTGGATCATACTCCAGAGGAATTACTCTACTTGTCCATTCAAAATCTTATCATGTCATATGGCACCAGTCTGGGATCAGGAA

Ace file of the UniGene sp_v1.1_unigene47080

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	vacuolar protein sorting-associated protein, putative	-	-	5.0e-11	66%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	69%
Blast2go	predicted protein [Populus trichocarpa]	-	-	4.73694e-11	90%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9HIJ3

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 545 aas, your sequence is shorter than subject: 98 - 4264

Fln protein: NWPCDGSSFNSI*GRQHQCGKSG*LDAKK*RFGSHACWDFGILSMRTYAVSCWI*YQFHVIVELAEFGLSVVDHTPEELLYLSIQNLIMSYGTSLGSG

Protein Length: 99

Fln nts: AAACTGGCCCTGTGATGGCTCTTCGTTTAACAGTATTTAAGGAAGGCAACACCAATGTGGTAAAAGTGGCTGACTGGATGCCAAGAAATGAAGATTTGGCAGTCATGCCTGTTGGGATTTTGGAATCCTCTCAATGCGAACATACGCTGTCAGCTGTTGGATCTGATATCAGTTTCATGTTATTGTTGAGCTTGCAGAATTTGGGCTGTCTGTGGTGGATCATACTCCAGAGGAATTACTCTACTTGTCCATTCAAAATCTTATCATGTCATATGGCACCAGTCTGGGATCAGGAA

Fln Alignment:

sp_v1.1_unigene47080___QFHVIVELAEFGLSVVDHTPEELLYLSIQNLIMSYGTSLGSG
B9HIJ3_______________EFHVVLELAELGISVIDHTPEEILYLSVQNLLLAYSTGLGSG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain