SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene47054

Length: 811 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene47054

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Aspartic proteinase, putative n=1 Tax=Ricinus communis RepID=B9SVA7_RICCO	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	83%
Blast2go	aspartic proteinase	-	-	82%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to cadmium ion	GO:0046686	Biological Process	0.0	82%
Blast2go	vacuole	GO:0005773	Cellular Component	0.0	82%

Source	InterPros	Term	Type	Identity
Blast2go	Peptidase A1	IPR001461	-	82%
Blast2go	Peptidase aspartic, active site	IPR001969	-	82%
Blast2go	Peptidase aspartic, catalytic	IPR009007	-	82%
Blast2go	Peptidase aspartic	IPR021109	-	82%

Full-Lengther Next Prediction

SNPs (tot: 26)

Position	A %	C %	G %	T %	Probability
53		75		25	0.996479
55	25			25	0.995533
104	85		14		0.993537
106	85			14	0.993541
112	14	85			0.993537
184	50	50			1.0
379	75	25			0.996473
380	75		25		0.996474
382	75	25			0.996473
385	75		25		0.996473
387		25	75		0.996473
388		25	75		0.996473
399	75			25	0.996473
400		25	75		0.996474
402		25	75		0.996479
403			75	25	0.996474
404		25	75		0.996479
405	25		75		0.996479
413	25		75		0.996473
547	90			10	0.90298
551	10			90	0.90298
554	90	10			0.90298
760		88	11		0.923564
762		88		11	0.923564
764		88		11	0.923564
765	88	11			0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain