SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene46864

Length: 458 nt

UniGene Fasta

>sp_v1.1_unigene46864
ACTTATGCCCAATACAAAAGGTGGCACTGATTATGTACTGTTGCATGCAGGAATTCCCATGGCCAATGTAAGCTTGCATTTATCAGGAGCTCATAATGTTGTAAATTCTTTAGCGGTTATTGCTTTAGTTGCTGCACTCAGTGCAGGACAAACTAATGGTTATGATGTCAGATACCAGTTGAAAACAACACAAGAAGTTGTCGAGGCTACATGTAAATATTTAGAAAACTTCACTGGCATTTGTAGGCGCTTTGAATTTATTGGTAAGACTGAAAATTGTGATGTATATGATGACTATGCTCATCATCCAACTGAAGTCCAGGCAGTTCTCCAGGCGGCTCGTCAGAGATTTGTTCATCAAGCTCTCTGGGTTGTGTTTCAACCGCATACTTACAGCCGTCTAGCAGCATTATTGCAAGAGTTTGCACTAGCATTCAAGGAGGCAGACCGTGTAATTA

Ace file of the UniGene sp_v1.1_unigene46864

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-N-acetylmuramate-alanine ligase n=1 Tax=Physcomitrella patens RepID=Q3LHF7_9BRYO	-	-	2.0e-25	41%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	56%
Blast2go	udp-n-acetylmuramate--alanine ligase	-	-	1.88699e-28	67%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Mur ligase, C-terminal	IPR004101	-	1.88699e-28	67%
Blast2go	Mur ligase, central	IPR013221	-	1.88699e-28	67%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D8R8I6

Fln msg: Distance to subject end: 83 aas, your sequence is shorter than subject: 152 - 521

Fln protein: LMPNTKGGTDYVLLHAGIPMANVSLHLSGAHNVVNSLAVIALVAALSAGQTNGYDVRYQLKTTQEVVEATCKYLENFTGICRRFEFIGKTENCDVYDDYAHHPTEVQAVLQAARQRFVHQALWVVFQPHTYSRLAALLQEFALAFKEADRVI

Protein Length: 153

Fln nts: ACTTATGCCCAATACAAAAGGTGGCACTGATTATGTACTGTTGCATGCAGGAATTCCCATGGCCAATGTAAGCTTGCATTTATCAGGAGCTCATAATGTTGTAAATTCTTTAGCGGTTATTGCTTTAGTTGCTGCACTCAGTGCAGGACAAACTAATGGTTATGATGTCAGATACCAGTTGAAAACAACACAAGAAGTTGTCGAGGCTACATGTAAATATTTAGAAAACTTCACTGGCATTTGTAGGCGCTTTGAATTTATTGGTAAGACTGAAAATTGTGATGTATATGATGACTATGCTCATCATCCAACTGAAGTCCAGGCAGTTCTCCAGGCGGCTCGTCAGAGATTTGTTCATCAAGCTCTCTGGGTTGTGTTTCAACCGCATACTTACAGCCGTCTAGCAGCATTATTGCAAGAGTTTGCACTAGCATTCAAGGAGGCAGACCGTGTAATTA

Fln Alignment:

sp_v1.1_unigene46864___LMPNTKGGTDYVLLHAGIPMANVSLHLSGAHXXXXXXXXXXXXXXXXXGQTNGYDVRYQLKTTQEVVEATCKYLENFTGICRRFEFIGKTENCDVYDDYAHHPTEVQAVLQAARQRFVHQALWVVFQPHTYSR
D8R8I6_______________LVPNILGGTDYVAVYRNRPMARVSLKLPGTYNVLNSLAVLAAVSLLAFKGKGSCDESGQLKAMAVAAQAASSALQSFQGLRRRFEYVGTVRRCDIYDDYAHHPTEVRAVLQAARQRFDKQPIWVVFQPHTYSR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain