SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene46442

Length: 380 nt

UniGene Fasta

>sp_v1.1_unigene46442
ATTTGGGAGCACTTGTTCGTCGTCGGCCGTTCAATCTTCGTCCCTGCTTCTCGCTTCACCAACGTTGGCCGTTCAATCTTCGTCCCTGCTTCTCGCTTCACCAACGTCGGCCGTTCTCCTCGTCAGGGGATCATCCGAAACAGAGGGATTCCGGTCACATTCCCGCGGGTTTCGAGATAGATCTATCGTATCCCTCGTACATGGTATGGGGATCCAACACAGGCGTCGGAAAGACTCTCGTTTCTGCCGGGCTGGCTACCTCAATCATCTGCTCTTCTACCGCCACTGATGCACCTCCAAATGTTCACTACATAAAGCCCGTTCAGACCGGCTTTCCCCAGGATTCCGACTCCCGGTTCGTGTCCCGCAAGGTCTCCGAT

Ace file of the UniGene sp_v1.1_unigene46442

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative adenosylmethion (ISS) [Ostreococcus tauri] emb\|CAL56482.1\| putative adenosylmethion (ISS) [Ostreococcus tauri]	-	-	2.0e-11	51%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	56%
Blast2go	mitochondrial bifunctional diaminopelargonate synthetase	-	-	8.31976e-16	68%

Source	ECs	Term	Type	e value	Identity
Blast2go	Adenosylmethionine--8-amino-7-oxononanoate transaminase.	EC:2.6.1.62	-	8.31976e-16	68%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Biotin metabolism	00780		8.31976e-16	68%
Blast2go	Metabolic pathways	01100		8.31976e-16	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	biotin biosynthetic process	GO:0009102	Biological Process	8.31976e-16	68%
Blast2go	adenosylmethionine-8-amino-7-oxononanoate transaminase activity	GO:0004015	Molecular Function	8.31976e-16	68%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9N8U3

Fln msg: Distance to subject end: 294 aas, No stop codon before M and M found is too far from subject M, your sequence is shorter than subject: 60 - 393

Fln protein: MVWGSNTGVGKTLVSAGLATSIICSSTATDAPPNVHYIKPVQTGFPQDSDSRFVSRKVSD

Protein Length: 61

Fln nts: ATTTGGGAGCACTTGTTCGTCGTCGGCCGTTCAATCTTCGTCCCTGCTTCTCGCTTCACCAACGTTGGCCGTTCAATCTTCGTCCCTGCTTCTCGCTTCACCAACGTCGGCCGTTCTCCTCGTCAGGGGATCATCCGAAACAGAGGGATTCCGGTCACATTCCCGCGGGTTTCGAGATAGATCTATCGTATCCCTCGTACATGGTATGGGGATCCAACACAGGCGTCGGAAAGACTCTCGTTTCTGCCGGGCTGGCTACCTCAATCATCTGCTCTTCTACCGCCACTGATGCACCTCCAAATGTTCACTACATAAAGCCCGTTCAGACCGGCTTTCCCCAGGATTCCGACTCCCGGTTCGTGTCCCGCAAGGTCTCCGAT

Fln Alignment:

sp_v1.1_unigene46442___IDLSYPSYMVWGSNTGVGKTLVSAGLATSIICSSTATDAPPNVHYIKPVQTGFPQDSDSRFVSRKVS
B9N8U3_______________LPLSFPTYMIWGSNTSLGKTLISTGLASSFLLSPRTTNKTPKFVYLKPIQTGFPSDSDSHFVFSKLS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain