SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene46402

Length: 306 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene46402
GTCCAGTGTTTTCTATGGTTGTCACTTCTTATGGTGAGCTTTGGACAGGATCCGAGATTGGTGCTATGAGAGCTTGGCCATGGGAGGTTGCTGAAAAAGCTCTTTTAACCGACCTAAAAAACAATTCTAGTACTGTTTACTTGATGGAAGGATCATGCATTGATCTAAGAAGCCGTATTGCTACAACTGGTGCATCTATTTTAAATACTGATATAAAATTTTTGGCATCTGATCACTTGAGAGGAAGAGTTTGGAGTGGAGGACCTTACTCCTTGGCTGTCTGGGATGCCCGGACAAGGGCTGTTC

Ace file of the UniGene sp_v1.1_unigene46402

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	FRA3; FRA3 (FRAGILE FIBER3); inositol or phosphatidylinositol phosphatase	-	-	8.0e-19	43%
FL-Next	sp=Type II inositol-1,4,5-trisphosphate 5-phosphatase FRA3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	43%
Blast2go	inositol polyphosphate 5-phosphatase	-	-	3.01185e-26	65%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to wounding	GO:0009611	Biological Process	3.01185e-26	65%
Blast2go	response to nutrient	GO:0007584	Biological Process	3.01185e-26	65%
Blast2go	phloem or xylem histogenesis	GO:0010087	Biological Process	3.01185e-26	65%
Blast2go	response to blue light	GO:0009637	Biological Process	3.01185e-26	65%
Blast2go	root development	GO:0048364	Biological Process	3.01185e-26	65%
Blast2go	sugar mediated signaling pathway	GO:0010182	Biological Process	3.01185e-26	65%
Blast2go	response to abscisic acid stimulus	GO:0009737	Biological Process	3.01185e-26	65%
Blast2go	auxin homeostasis	GO:0010252	Biological Process	3.01185e-26	65%
Blast2go	inositol or phosphatidylinositol phosphatase activity	GO:0004437	Molecular Function	3.01185e-26	65%
Blast2go	nucleus	GO:0005634	Cellular Component	3.01185e-26	65%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q84W55

Fln msg: Distance to subject end: 770 aas, your sequence is shorter than subject: 101 - 1101

Fln protein: PVFSMVVTSYGELWTGSEIGAMRAWPWEVAEKALLTDLKNNSSTVYLMEGSCIDLRSRIATTGASILNTDIKFLASDHLRGRVWSGGPYSLAVWDARTRAV

Protein Length: 102

Fln nts: GTCCAGTGTTTTCTATGGTTGTCACTTCTTATGGTGAGCTTTGGACAGGATCCGAGATTGGTGCTATGAGAGCTTGGCCATGGGAGGTTGCTGAAAAAGCTCTTTTAACCGACCTAAAAAACAATTCTAGTACTGTTTACTTGATGGAAGGATCATGCATTGATCTAAGAAGCCGTATTGCTACAACTGGTGCATCTATTTTAAATACTGATATAAAATTTTTGGCATCTGATCACTTGAGAGGAAGAGTTTGGAGTGGAGGACCTTACTCCTTGGCTGTCTGGGATGCCCGGACAAGGGCTGTTC

Fln Alignment:

sp_v1.1_unigene46402___PVFSMVVTSYGELWTGSEIGAMRAWPWEVA-EKALLTDLKNNSSTVYLMEGSCIDLRSRIATTG-ASILNTDIKFLASDHLRGRVWSGGPYSLAVWDARTR
Q84W55_______________PVLSIAISAYGDIWSGSEGGALKVWPWDGALGKSLSLKMEERHMAALAVERSYIDPRNMVSANGFANTLTSDVTFLVSDHTRARVWSASPLTFAIWDARTR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain