SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene45985

Length: 322 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene45985
CGTCGTGACCTTGGCTGTCACTCAATTTTTGACATGTGTATGGAGCATTCGTCTCACACACAGTTACTTTAGAAGGGAAGAATGGCAGTGGGGAGCCAGGGAGGACTGGAGATTCGCTGATCTGCGAAAGCGCTATGCCAAGCATTGGTGGTGGATGTCCTTTTTGCTGTATATGTCTCTCAGCAGATCTTCCTCGTTGGGATTTGCCTTCCAATCTTTGAAGTGCATAACAGTCAACAACCTTGGAATGCTTGGGATTACTTTGCTACTTTGGTTTGCACAACAGGCATTGTGTTTGCTTACTTTGCAGATACTCAGCTCT

Ace file of the UniGene sp_v1.1_unigene45985

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	oxidoreductase, acting on the CH-CH group of donors	-	-	7.0e-18	46%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	79%
Blast2go	membrane protein	-	-	6.12586e-36	82%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell part	GO:0044464	Cellular Component	6.12586e-36	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein of unknown function DUF1295	IPR010721	-	6.12586e-36	82%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9S1I7

Fln msg: Separated hits, possible frame ERROR between 157 and 163, Distance to subject end: 111 aas, your sequence is shorter than subject: 107 - 332

Fln protein: VVTLAVTQFLTCVWSIRLTHSYFRREEWQWGAREDWRFADLRKRYAKHWWWxxxFAVYVSQQIFLVGICLPIFEVHNSQQPWNAWDYFATLVCTTGIVFAYFADTQL

Protein Length: 108

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTTTGACATGTGTATGGAGCATTCGTCTCACACACAGTTACTTTAGAAGGGAAGAATGGCAGTGGGGAGCCAGGGAGGACTGGAGATTCGCTGATCTGCGAAAGCGCTATGCCAAGCATTGGTGGTGGATxxxxxxTTTTGCTGTATATGTCTCTCAGCAGATCTTCCTCGTTGGGATTTGCCTTCCAATCTTTGAAGTGCATAACAGTCAACAACCTTGGAATGCTTGGGATTACTTTGCTACTTTGGTTTGCACAACAGGCATTGTGTTTGCTTACTTTGCAGATACTCAGCTCT

Fln Alignment:

sp_v1.1_unigene45985___LTCVWSIRLTHSYFRREEWQWGAREDWRFADLRKRYAKHWWWMxxFAVYVSQQIFLVGICLPIFEVHNSQQPWNAWDYFATLVCTTGIVFAYFADTQL
A9S1I7_______________LLWVWSIRLTHSYFRRENWQWGEREDWRFSQLRKQHSKHWWWMxxFAAYLSQQIFLVGICLPLYAVHSKQTPWNTWDTIACFLCATGIVLAYFADTQL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain