SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene45932

Length: 346 nt

UniGene Fasta

>sp_v1.1_unigene45932
AATGCGGACGGTCCAGAGTCAAACAGGGAGAGGTGGTGTGGCCTCGCATGGTGGCTAGCAAATGGCTTCGCCTAAGATTTGGTGGAGCTGAGAAATTCAATTGTGATGCCAAGGACGAAGATGAGTCCTTTAAGCGGTCGCACTTGATGCGGGGTCAATCGGAAGGGCTGTGGTCGAATTGCAAGGTGAATGATAATGAGGATTACAGGATATTTGTGGGGACATGGAATGTCGGTGGCAGAAGGGCGCAGGATGATTTGGATTTGGAGGTGGAGGATTGGCTTAATTCCAGACCAGACGCTGAGTCCGCTGATATATATGTTATTGGCTTCCAAGAAATCGTTCC

Ace file of the UniGene sp_v1.1_unigene45932

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Endonuclease/exonuclease/phosphatase family protein (Fragment) n=2 Tax=Arabidopsis RepID=D7LJT2_ARALY	-	-	4.0e-11	38%
FL-Next	Isoform 2 of Type I inositol-1,4,5-trisphosphate 5-phosphatase 2 OS=Arabidopsis thaliana GN=IP5P2	-	-	0.0	44%
Blast2go	endonuclease exonuclease phosphatase family protein	-	-	3.65088e-11	49%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Endonuclease/exonuclease/phosphatase	IPR005135	-	3.65088e-11	49%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9FUR2-2

Fln msg: Distance to subject end: 460 aas, your sequence is shorter than subject: 114 - 613

Fln protein: CGRSRVKQGEVVWPRMVASKWLRLRFGGAEKFNCDAKDEDESFKRSHLMRGQSEGLWSNCKVNDNEDYRIFVGTWNVGGRRAQDDLDLEVEDWLNSRPDAESADIYVIGFQEIV

Protein Length: 115

Fln nts: AATGCGGACGGTCCAGAGTCAAACAGGGAGAGGTGGTGTGGCCTCGCATGGTGGCTAGCAAATGGCTTCGCCTAAGATTTGGTGGAGCTGAGAAATTCAATTGTGATGCCAAGGACGAAGATGAGTCCTTTAAGCGGTCGCACTTGATGCGGGGTCAATCGGAAGGGCTGTGGTCGAATTGCAAGGTGAATGATAATGAGGATTACAGGATATTTGTGGGGACATGGAATGTCGGTGGCAGAAGGGCGCAGGATGATTTGGATTTGGAGGTGGAGGATTGGCTTAATTCCAGACCAGACGCTGAGTCCGCTGATATATATGTTATTGGCTTCCAAGAAATCGTTCC

Fln Alignment:

sp_v1.1_unigene45932___FKRSHLMRGQSEGLWSNCKVNDNEDYRIFVGTWNVGGRRAQDDLDLEVEDWLNSRPDAESADIYVIGFQEIV
Q9FUR2-2_____________YQRKH-RRGKSETL--RAQYINTKDIKVTVATWNVAGKRPSD--DLEIEDWLST---DNPSDIYIIGFQEVV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain