SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene45897

Length: 391 nt

UniGene Fasta

>sp_v1.1_unigene45897
TTGTCTCTTGCGCGGACTTGACTGCTCTCGCAGCTCGCGAGTCGGTCAGAGCAGTTGGAGGACCAGAATATCGAGTGCCTCTGGGGCGCAGGGACAGCCTGAAATTCGCCACACGAAAAGTGACCGTTGCCAACCTCCCGTCTCCCACTTTTAATGCGACCACCCTCATCAACGCTTTCGCCAAAAAGAACTCGACGTCACAGACCTCGTTTCTCTTTCAGGTGGGCACAGCATCGGCATCGCGCACTGCAGCTCCTTCGCCAATCGTCTATACCCAACGCAGGACAGCACTTTGAATAAAAACTTCGCCAAGGGTCTGTACACCACCTGCCCTTCGAATACCACCACCAACACTACCGTCTTAGACATTCGCACGCCCAACCTGTTCGAC

Ace file of the UniGene sp_v1.1_unigene45897

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peroxidase n=1 Tax=Picea abies RepID=Q5W5I4_PICAB	-	-	9.99967e-42	76%
FL-Next	tr=Peroxidase; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	76%
Blast2go	peroxidase	-	-	2.38403e-41	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	2.38403e-41	78%
Blast2go	vacuole	GO:0005773	Cellular Component	2.38403e-41	78%
Blast2go	membrane	GO:0016020	Cellular Component	2.38403e-41	78%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	2.38403e-41	78%
Blast2go	Haem peroxidase	IPR010255	-	2.38403e-41	78%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q5W5I4

Fln msg: Overlapping hits, possible frame ERROR between 191 and 176, Distance to subject end: 94 aas, your sequence is shorter than subject: 130 - 353

Fln protein: VSCADLTALAARESVRAVGGPEYRVPLGRRDSLKFATRKVTVANLPSPTFNATTLINxxxxxxxDVTDLVSLSGGHSIGIAHCSSFANRLYPTQDSTLNKNFAKGLYTTCPSNTTTNTTVLDIRTPNLFD

Protein Length: 131

Fln nts: TTGTCTCTTGCGCGGACTTGACTGCTCTCGCAGCTCGCGAGTCGGTCAGAGCAGTTGGAGGACCAGAATATCGAGTGCCTCTGGGGCGCAGGGACAGCCTGAAATTCGCCACACGAAAAGTGACCGTTGCCAACCTCCCGTCTCCCACTTTTAATGCGACCACCCTCATCAACxxxxxxxxxxxxxxxxxxxxxGACGTCACAGACCTCGTTTCTCTTTCAGGTGGGCACAGCATCGGCATCGCGCACTGCAGCTCCTTCGCCAATCGTCTATACCCAACGCAGGACAGCACTTTGAATAAAAACTTCGCCAAGGGTCTGTACACCACCTGCCCTTCGAATACCACCACCAACACTACCGTCTTAGACATTCGCACGCCCAACCTGTTCGAC

Fln Alignment:

sp_v1.1_unigene45897___VSCADLTALAARESVRAVGGPEYRVPLGRRDSLKFATRKVTVANLPSPTFNATTLINAxxxxxLDVTDLVSLSGGHSIGIAHCSSFANRLYPTQDSTLNKNFAKGLYXXXXXXXXXXXXVLDIRTPNLFD
Q5W5I4_______________VSCADVTALAAKESVRAAGGPQYRIPLGRRDSLKFATQNVTLANLPAPSSKVTTLIKAxxxxxLNVTDLVALSGGHTIGIGHCTSFTDRLYPKQDTTLNKSFAQRLYTACPPKTSSNTTVLDIRTPNVFD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain