SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene45704

Length: 247 nt

UniGene Fasta

>sp_v1.1_unigene45704
AGGAGGAGGAGAAGAATGAAGGGGGGGCCTGTGCTCGTTTTCTGCGGCGGAGGCGGCGTCCAGATGTATACGCTGGAGGATCTACTGCGTGCTTCGGCTGAAATTCTGGGAAGGGGCAGCGTTGGGATCACGTATAGAGCTGTCATGCAATGGGGTCTCATGGTGACGGTGAAGAGATTGAAGAATGGGCCTAAGGGTTGCAAAGCGTTTGAGAAGCAAATGGATGCCATCGGGAAGCTCAAACATC

Ace file of the UniGene sp_v1.1_unigene45704

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	receptor protein kinase, putative	-	-	5.0e-12	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	55%
Blast2go	protein	-	-	9.38225e-12	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	9.38225e-12	75%
Blast2go	transferase activity	GO:0016740	Molecular Function	9.38225e-12	75%
Blast2go	plasma membrane	GO:0005886	Cellular Component	9.38225e-12	75%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LN40

Fln msg: Distance to subject end: 259 aas, your sequence is shorter than subject: 77 - 340

Fln protein: MKGGPVLVFCGGGGVQMYTLEDLLRASAEILGRGSVGITYRAVMQWGLMVTVKRLKNGPKGCKAFEKQMDAIGKLKH

Protein Length: 78

Fln nts: AGGAGGAGGAGAAGA_-_ATGAAGGGGGGGCCTGTGCTCGTTTTCTGCGGCGGAGGCGGCGTCCAGATGTATACGCTGGAGGATCTACTGCGTGCTTCGGCTGAAATTCTGGGAAGGGGCAGCGTTGGGATCACGTATAGAGCTGTCATGCAATGGGGTCTCATGGTGACGGTGAAGAGATTGAAGAATGGGCCTAAGGGTTGCAAAGCGTTTGAGAAGCAAATGGATGCCATCGGGAAGCTCAAACATC

Fln Alignment:

sp_v1.1_unigene45704___YTLEDLLRASAEILGRGSVGITYRAVMQWGLMVTVKRLKNGPKGCKAFEKQMDAIGKLKH
B8LN40_______________FDLEDLLRASAEVLGKGSVGTAYKAVLEDGTTVVVKRLKDVAANRKDFEQQMELVGRIRH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain