SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene45291

Length: 510 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene45291
AAATCGTCATCGAAAGTAGTGCCTATATTGTTAGGAAGTATGGGCGGAACAGCTCTAGTTTCGGTGATGTGTTCGATACTCTTCTATCGACATATTACACAAGGAAGGAACAAGGACAGAACAGTCTGTGCAGATGTGAATTTAGTCACGAGGGAAAATTTCGACCAATTTCTCTTCGACTACGAGGTTATGAGAGAAGCGACTGGAAATTTTAACAGAAACAATATTCTCGGCAAAGGAGGATTCGGTGAAGTTTATAAGGGAACTCTTCTGGATGGCAGGGATGTCGCGGTTAAGAAACTCTATAGAAGGCAGACTGCTCAAGCTGCGGCGGAGTTTCTGAGAGAAGTGAAGCTCCTCACTAGCGTCCGTCACCGTAATCTTGTTCGTTTACTCGGATGTTGCACGCGGGGTCATGACCGGTTGCTGGTATACGAGTTCATGTCAAATAACAGTCTTGACAAGCATTTGTTCGGAAAGATACGAAATGTTTTGAGTTGGGAAAATCGT

Ace file of the UniGene sp_v1.1_unigene45291

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SJM8_RICCO	-	-	1.0e-30	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%
Blast2go	serine-threonine protein plant-	-	-	2.15786e-30	66%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	2.15786e-30	66%
Blast2go	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	2.15786e-30	66%
Blast2go	Protein kinase-like domain	IPR011009	-	2.15786e-30	66%
Blast2go	Protein kinase, ATP binding site	IPR017441	-	2.15786e-30	66%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PPW7

Fln msg: Distance to subject end: 237 aas, your sequence is shorter than subject: 170 - 702

Fln protein: KSSSKVVPILLGSMGGTALVSVMCSILFYRHITQGRNKDRTVCADVNLVTRENFDQFLFDYEVMREATGNFNRNNILGKGGFGEVYKGTLLDGRDVAVKKLYRRQTAQAAAEFLREVKLLTSVRHRNLVRLLGCCTRGHDRLLVYEFMSNNSLDKHLFGKIRNVLSWENR

Protein Length: 171

Fln nts: AAATCGTCATCGAAAGTAGTGCCTATATTGTTAGGAAGTATGGGCGGAACAGCTCTAGTTTCGGTGATGTGTTCGATACTCTTCTATCGACATATTACACAAGGAAGGAACAAGGACAGAACAGTCTGTGCAGATGTGAATTTAGTCACGAGGGAAAATTTCGACCAATTTCTCTTCGACTACGAGGTTATGAGAGAAGCGACTGGAAATTTTAACAGAAACAATATTCTCGGCAAAGGAGGATTCGGTGAAGTTTATAAGGGAACTCTTCTGGATGGCAGGGATGTCGCGGTTAAGAAACTCTATAGAAGGCAGACTGCTCAAGCTGCGGCGGAGTTTCTGAGAGAAGTGAAGCTCCTCACTAGCGTCCGTCACCGTAATCTTGTTCGTTTACTCGGATGTTGCACGCGGGGTCATGACCGGTTGCTGGTATACGAGTTCATGTCAAATAACAGTCTTGACAAGCATTTGTTCGGAAAGATACGAAATGTTTTGAGTTGGGAAAATCGT

Fln Alignment:

sp_v1.1_unigene45291___QFLFDYEVMREATGNFNRNNILGKGGFGEVYKGTLLDGRDVAVKKLYRRQTAQAAAEFLREVKLLTSVRHRNLVRLLGCCTRGHDRLLVYEFMSNNSLDKHLFGKI-RNVLSWENR
C0PPW7_______________ELIFKFDILRESTSNFKAENKLGEGGFGSVFKGVLPDGREVAVKRLFMG-TRQADAEFLNEANLISRVQHRNLVKLLGCSVEVSERLLVYEYLQNSSLDKILFDPTKRHLLDWKKR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain