SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene44526

Length: 378 nt

UniGene Fasta

>sp_v1.1_unigene44526
AGAGTGAAATGGTCTCTACACGCCAGAGAGGAAATTATCTTCGAGCTTTCAGAGCATTTGAGGGGCAAAGTCACACAGCAAATATTGGAAAAAGTAAGAGTGAGCACAAGAGAAATGATTGGTGAGCAAGAAGCTGTTCGAGACAGACTCTTTACTGTTCAAGATGTTATGCAGAACAATGTGCGATCATGGTTACAGGACAAAAGTGTCCGTATCACACATAATATGTCAGTTTTTGGAGGTGGGGGCCTAGTTTTATCTTTAATTGTAGGGCTTTTTGGAATTAATCTTGATGGTATCCCTGGTGTGCACAATAAACCATATGCATTTGGTGTGTTTACTGCAATATTAATCCTTCTGGGTGCGACACTGATTGGC

Ace file of the UniGene sp_v1.1_unigene44526

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CorA domain containing protein	-	-	3.0e-08	23%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	72%
Blast2go	magnesium transporter -like family protein	-	-	8.28126e-32	85%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB	IPR002523	-	8.28126e-32	85%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9S172

Fln msg: Distance to subject end: 68 aas, your sequence is shorter than subject: 126 - 570

Fln protein: RVKWSLHAREEIIFELSEHLRGKVTQQILEKVRVSTREMIGEQEAVRDRLFTVQDVMQNNVRSWLQDKSVRITHNMSVFGGGGLVLSLIVGLFGINLDGIPGVHNKPYAFGVFTAILILLGATLIG

Protein Length: 127

Fln nts: AGAGTGAAATGGTCTCTACACGCCAGAGAGGAAATTATCTTCGAGCTTTCAGAGCATTTGAGGGGCAAAGTCACACAGCAAATATTGGAAAAAGTAAGAGTGAGCACAAGAGAAATGATTGGTGAGCAAGAAGCTGTTCGAGACAGACTCTTTACTGTTCAAGATGTTATGCAGAACAATGTGCGATCATGGTTACAGGACAAAAGTGTCCGTATCACACATAATATGTCAGTTTTTGGAGGTGGGGGCCTAGTTTTATCTTTAATTGTAGGGCTTTTTGGAATTAATCTTGATGGTATCCCTGGTGTGCACAATAAACCATATGCATTTGGTGTGTTTACTGCAATATTAATCCTTCTGGGTGCGACACTGATTGGC

Fln Alignment:

sp_v1.1_unigene44526___RVKWSLHAREEIIFELSEHLRGKVTQQILEKVRVSTREMIGEQEAVRDRLFTVQDVMQNNVRSWLQDKSVRITHNMXXXXXXXXXXXXXXXXXXXNLDGIPGVHNKPYAFGVF
B9S172_______________RVKWSLHAREEIVFELLHHLRGNAARILLEEIRKSTREMMEEQEAVRGRLFTIQDVMQSTVRAWLQDRSLRVTHNLAVFGGCGLVLSIITGLFGINVDGIPGAENTPYAFGVF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain