SustainPineDB

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Assembly info
Unigenes
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene44218

Length: 308 nt

UniGene Fasta

>sp_v1.1_unigene44218
GAAGCTCGCTTCAAAAGTAATTTGACACATCATCTGTCTGAGCTTAAAGAATTACCATCAAAGAGAGGAGATGACTTACAAACAAAGAGTTTGCTCGAGCTGTATGGTCTTAAGCTGGCAGATTTACAACAAAAGGTACGTTCTGAAGTCAGTGCTGAGTATGATCTACGTGAAGAATGTGCAAATCCAGGAAAACAGCTCTTTGACTGGGGTCTTATGCGTTTGCGTCGAACCCTCCCTCTTTTTGGCATGGGAGATGCTTCAACAACTGAAGCTGATGAGCGCCAGCGCAGGAGGAGGGATGCAGA

Ace file of the UniGene sp_v1.1_unigene44218

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO	-	-	3.0e-26	67%
FL-Next	tr=ATP binding protein, putative; Ricinus communis (Castor bean).	-	-	0.0	67%
Blast2go	chromatin remodeling complex subunit	-	-	5.13743e-26	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	5.13743e-26	77%
Blast2go	response to salt stress	GO:0009651	Biological Process	5.13743e-26	77%
Blast2go	response to heat	GO:0009408	Biological Process	5.13743e-26	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RTY5

Fln msg: Distance to subject end: 869 aas, your sequence is shorter than subject: 102 - 1079

Fln protein: EARFKSNLTHHLSELKELPSKRGDDLQTKSLLELYGLKLADLQQKVRSEVSAEYDLREECANPGKQLFDWGLMRLRRTLPLFGMGDASTTEADERQRRRRDA

Protein Length: 103

Fln nts: GAAGCTCGCTTCAAAAGTAATTTGACACATCATCTGTCTGAGCTTAAAGAATTACCATCAAAGAGAGGAGATGACTTACAAACAAAGAGTTTGCTCGAGCTGTATGGTCTTAAGCTGGCAGATTTACAACAAAAGGTACGTTCTGAAGTCAGTGCTGAGTATGATCTACGTGAAGAATGTGCAAATCCAGGAAAACAGCTCTTTGACTGGGGTCTTATGCGTTTGCGTCGAACCCTCCCTCTTTTTGGCATGGGAGATGCTTCAACAACTGAAGCTGATGAGCGCCAGCGCAGGAGGAGGGATGCAGA

Fln Alignment:

sp_v1.1_unigene44218___EARFKSNLTHHLSELKELPSKRGDDLQTKSLLELYGLKLADLQQKVRSEVSAEYDLREECANPGKQLFDWGLMRLRRTLPLFGMGDA
B9RTY5_______________EKRYQGHILNRLHELEELPSTRGEDLQTKCLLELYGLKLADLQRKVRTEVNSEYWLRLKCASPDKQLFDWGMMRLRR--PLYGVGDA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain