SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene44093

Length: 395 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene44093
GGCAATACCATCAGTAGCAAGGGTCTTTCTGGTTTGTACCGTGGTTTCGTTCCATCTGTTGTTGGTATTGTTGTCTACCGTGGTCTTTACTTCGGAATGTACGACTCTCTCAAACCCGTCTTGCTCACTGGTCCTCTCGAAGGAAACTTCTTGGCTTCCTTCTTGTTGGGTTGGGCTGTTACAACTGGTTCCGGTTTGGCTTCTTATCCTTTGGACACTATCCGTCGTCGTATGATGATGACAAGTGGTGGTACTGGACCACATTACCGCAACATGATGCACGCTGGTCAAGCCATTATCGCCAAGGAAGGTGTCAAATCCCTCTTCAAGGGTGCAGGTGCCAACATCTTGCGTGGTATTGCCGGTGCCGGTGTGTTGTCCGGTTACGACAAATT

Ace file of the UniGene sp_v1.1_unigene44093

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Eukaryotic ADP/ATP carrier n=2 Tax=Filobasidiella neoformans RepID=Q2XPZ3_CRYNV	-	-	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	69%
Blast2go	carrier protein mitochondrial precursor (adp atp translocase 2)	-	-	89%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Mitochondrial substrate/solute carrier	IPR018108	-	0.0	89%
Blast2go	Mitochondrial carrier domain	IPR023395	-	0.0	89%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVC6

Fln msg: STOP codon was not found. Distance to subject end: 14 aas, your sequence is shorter than subject: 131 - 390

Fln protein: GNTISSKGLSGLYRGFVPSVVGIVVYRGLYFGMYDSLKPVLLTGPLEGNFLASFLLGWAVTTGSGLASYPLDTIRRRMMMTSGGTGPHYRNMMHAGQAIIAKEGVKSLFKGAGANILRGIAGAGVLSGYDK

Protein Length: 132

Fln nts: GGCAATACCATCAGTAGCAAGGGTCTTTCTGGTTTGTACCGTGGTTTCGTTCCATCTGTTGTTGGTATTGTTGTCTACCGTGGTCTTTACTTCGGAATGTACGACTCTCTCAAACCCGTCTTGCTCACTGGTCCTCTCGAAGGAAACTTCTTGGCTTCCTTCTTGTTGGGTTGGGCTGTTACAACTGGTTCCGGTTTGGCTTCTTATCCTTTGGACACTATCCGTCGTCGTATGATGATGACAAGTGGTGGTACTGGACCACATTACCGCAACATGATGCACGCTGGTCAAGCCATTATCGCCAAGGAAGGTGTCAAATCCCTCTTCAAGGGTGCAGGTGCCAACATCTTGCGTGGTATTGCCGGTGCCGGTGTGTTGTCCGGTTACGACAAATT

Fln Alignment:

sp_v1.1_unigene44093___TISSKGLSGLYRGFVPSVVGIVVYRGLYFGMYDSLKPVLLTGPLEGNFLASFLLGWAVTTGSGLASYPLDTIRRRMMMTSGGTGPHYRNMMHAGQAIIAKEGVKSLFKGAGANILRGIAGAGVLSGYDK
A9NVC6_______________TLKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGDLQDNFLASFLLGWGITIGAGLASYPIDTVRRRMMMTS-GEAVKYKSSLDAFNQIVKNEGTKSLFKGAGANILRAIAGAGVLAGYDQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain